KEGG   Leishmania martiniquensis: 92516117
Entry
92516117          CDS       T10333                                 
Symbol
LSCM1_06173
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
lmat  Leishmania martiniquensis
Pathway
lmat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    92516117 (LSCM1_06173)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmat03019]
    92516117 (LSCM1_06173)
Messenger RNA biogenesis [BR:lmat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     92516117 (LSCM1_06173)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     92516117 (LSCM1_06173)
SSDB
Motif
Pfam: TRAM
Other DBs
NCBI-GeneID: 92516117
NCBI-ProteinID: XP_067178710
UniProt: A0A836GRI1
LinkDB
Position
23:713100..713957
AA seq 285 aa
MPVILHTGAHVAPGDTIFTSPAAVASSQDALEGCAAEEAEVVPGEGCVVQYVERYVAPTS
PSLLATSTVVERSIVATRHGVAQWDGRLVSVFALAPRALASADGTELAAARGGSTWVSSA
VSSSRHSVLGPRPGDAVHVRITRLNRLFAFGEIIAVNWSWCSHRSLTSTAAGGGSNSGVF
KGVLRQEDIRPFKPTKEQLLPPLPSLAFGLGDVVLAEVISQSDARQYQLSTIGEGFGVVE
GFMTTVEGPYGGHEKVKLDHIPGRRDAMMIRRTGEVVPRWCPLLP
NT seq 858 nt   +upstreamnt  +downstreamnt
atgccggtcatcctgcataccggtgctcacgttgcacctggtgacaccatcttcacctcc
cctgctgcggtggcaagctcgcaggatgccctcgaaggctgcgctgccgaagaggcggag
gttgtgccgggggaaggttgcgttgtgcagtacgtggagcgatacgtcgcgccaacgtca
ccatccttgctggcgacttcgacagtggtggagcgctcgatcgtagccactcgtcacggc
gtcgcacagtgggacggacgccttgtgtcggtcttcgccctcgccccccgcgccctcgcc
tcggctgacgggacggagcttgcggcagcgcgcggtggaagcacctgggtcagctccgca
gtctcgtcttcgcgacactctgtgctcgggccgcggccaggtgacgcagtgcatgtccgc
atcactcgactgaatcgcctcttcgcctttggtgagatcattgcggtaaactggagctgg
tgtagccatcgcagcctcacctccacggcggcgggcggcggcagcaatagcggcgtcttc
aagggcgtcctgcgacaggaggacattcggccatttaagcccacgaaagagcagctgcta
ccgcctctgccgtcgctggccttcgggctgggcgacgttgtgctcgctgaggtcatctca
cagtctgacgcccggcagtaccagctcagcaccattggcgagggcttcggcgtggtagaa
ggtttcatgaccactgtcgaggggccatacggcgggcatgagaaggtgaagctcgaccac
atacccggccgtcgcgacgccatgatgattcggaggacgggtgaggtggtgccgagatgg
tgcccgctgctgccgtag

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