Leishmania martiniquensis: 92516129
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Entry
92516129 CDS
T10333
Symbol
LSCM1_06185
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
lmat Leishmania martiniquensis
Pathway
lmat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92516129 (LSCM1_06185)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmat03019
]
92516129 (LSCM1_06185)
03041 Spliceosome [BR:
lmat03041
]
92516129 (LSCM1_06185)
Messenger RNA biogenesis [BR:
lmat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
92516129 (LSCM1_06185)
Spliceosome [BR:
lmat03041
]
Complex B
Other components
Prp19-related factors
92516129 (LSCM1_06185)
Complex C
92516129 (LSCM1_06185)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_C
NRDE-2
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
92516129
NCBI-ProteinID:
XP_067178722
UniProt:
A0A836HIY4
LinkDB
All DBs
Position
23:751029..753413
Genome browser
AA seq
794 aa
AA seq
DB search
MDGDPRVSALQWEVVKEASASPKTWAELARTTAATAAADPVERANAVTLVYERALRAFAS
SYKLWMAYIHYRQLETSRLCRPSEWFQSVREVYERALAALPQMPMLWVGYMEFVAAAEVP
RVTMARHVLARALAALPATQHHLLWKVAKRWCAQPVVPSATVRAVWRLYLSFHRSLHAKR
EYFQVLAQKGDFNAFLQECVHLGLPGKADKVAVQERDLLLGDVSFWQTVQTALQGKGWRF
TGDIRPLRELIDLGKSRCASPVELSMAFAVFLYGQGHMREGRQELRQLLDEAPEAQTLTS
LYHLAVEVEDQLVESFAVDPDLNQLDDAAYNGVVQHLFGDGDPLRHLERLVREFPLLLNQ
AQLRNSPHNATLWLKRAELVQEAVYAGRSTFDDLIGLYRQAIQQCTAGMSRVEGAAAQLF
SSCAQALIRGGKLDSAVVVLSEGTWCVPFTSAALNVQLLGLLVEVQLMSSSSPLSVRDTL
AERLAGGARGRGSKRGRNGLLQSSAALPHVVNHPHAWIMWCDICAAYDAANAAAWRHLVE
ALASSPAFSAEAACYVAHKAYACKHESIAVMMLERAVAATRQQPTAHLFVLEQYLSFLHV
RDGRKVPLHQFREVFSLVQHVTPVAIRTAPSAVMDLHVSCAYMEAAIGLYGTAVRMMQEI
CLVAIAALRGRDEHLRLLQGILEHSITFTEQRRGYDAVRTYCGTLVQRIQNALLLQRVAL
HWAAIEKRSGNTAQAHLILDACGDSQDPSTEHGEVYWRLWESLCTSVEEFEKVARRRQQA
AIRFGKHGGAKEPA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacccgcgagtgagtgccctacagtgggaggtagtgaaagaggcctcggct
tcgcccaagacatgggccgagctggcccgcaccaccgctgcgaccgccgcggctgatccg
gtggaaagggcgaacgccgtaacgctcgtgtacgagcgcgccctgcgtgcgttcgcttcc
tcctacaagctgtggatggcctacattcattaccgccagctggagaccagtaggctctgt
cggccgagcgagtggttccagtctgtgcgcgaggtgtacgagcgggcgttggcggcgctt
ccccaaatgccgatgctttgggtcggctacatggagtttgttgctgccgctgaagtgccg
cgtgtgacaatggcacgacacgtacttgcacgtgccctcgcagcgctgccagcgactcag
catcatctcctctggaaagttgcaaagcgctggtgcgcgcaacctgtcgtgcccagtgct
acggtccgagccgtctggcggctttacctgtccttccaccgttcgctgcatgcgaagcgg
gagtactttcaggtgctcgcgcagaagggagacttcaatgcattcctccaagagtgcgtg
cacctgggacttcccggtaaggcggacaaggtcgccgtccaggagcgcgacctgctcctg
ggcgacgtgagcttttggcagacggtgcaaacagccctgcaggggaagggctggcgcttc
acaggcgacatccgccctctgcgcgagctgatcgaccttggaaagtcgcggtgcgcctcc
ccagtggagctctccatggcgtttgcggtttttctttacggtcaggggcacatgcgggag
ggtcgacaggagctgcgacagctgttagacgaggcacctgaggcgcagacgctgacctcg
ctctaccaccttgccgtggaggtggaggatcagctcgtggaatcgttcgcggtggacccc
gatctcaatcagctggacgacgccgcgtataacggcgttgtacagcatctctttggcgac
ggcgacccgctcaggcatctcgagcgacttgtgcgcgagtttccgctgctactcaaccag
gcacagctgcggaacagtccgcacaatgcgacactgtggctgaagcgtgcggagctggtg
caagaggccgtctacgcgggccgctccacctttgacgatctcatcggcctgtatcgccag
gctattcagcagtgtactgcagggatgtcgcgcgtggagggggcagcggcacagctgttt
tcttcctgtgcccaggctctcattcgtgggggcaagctggacagcgccgtcgtggtgctc
agtgagggcacgtggtgcgtgccgttcaccagtgccgcgcttaacgtgcagcttctcggt
cttctcgtggaggtgcagctcatgtcgtcctcctcgcccttgtccgtcagggatacactg
gcggagcggttggccggtggtgctcgcggtagaggctcgaagcgcggccgaaacggactt
ctccagtcgagtgcagccctgccccacgtggtgaaccacccacacgcgtggatcatgtgg
tgtgacatttgcgctgcctacgacgcagccaacgcagctgcttggcgacaccttgtcgag
gcactcgccagctcgcccgccttctccgctgaggccgcctgctacgtggcccacaaggcc
tacgcttgtaagcacgagtcgattgctgtcatgatgctggagagagctgtcgctgccacg
cggcagcagcctaccgcgcacttgttcgtgctggagcagtacctctccttcctgcacgtc
cgtgacggtcgaaaggtacctttgcatcagtttcgtgaggtgttcagccttgtacagcat
gtcaccccggtcgccatacgcaccgcgccgtcggccgtcatggacctgcacgtcagctgt
gcttacatggaggcggcgatcggcctctacgggacagccgtccgcatgatgcaggagatt
tgtttggtcgctattgcagcgcttcgggggcgcgatgagcacctgcgtctcctgcagggc
attctagagcattcgatcaccttcacagagcagcgccggggctacgatgcagtgcgcacg
tactgcggaacgctcgttcaacgcatccagaacgcactcctcttgcagcgtgttgcactt
cattgggctgcaatcgagaagcgctctggcaacacagcacaggcacatcttatcctcgac
gcttgcggtgacagccaggacccatccacagagcatggcgaggtgtattggcggctgtgg
gagtctctctgcacaagtgtggaggagtttgaaaaggttgctaggcgtcggcaacaagca
gcgatccgcttcggcaaacatgggggcgcgaaggagccggcgtga
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