Leptospira mayottensis: DPV73_08820
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Entry
DPV73_08820 CDS
T05598
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
lmay
Leptospira mayottensis
Brite
KEGG Orthology (KO) [BR:
lmay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DPV73_08820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmay03400
]
DPV73_08820
Enzymes [BR:
lmay01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
DPV73_08820
DNA repair and recombination proteins [BR:
lmay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DPV73_08820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WGR
DNA_ligase_A_M
RNA_ligase
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
AXR68102
LinkDB
All DBs
Position
I:1848100..1849575
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AA seq
491 aa
AA seq
DB search
MKHYLTYKDDTSDKFWSIEISGNSFTVVYGKIGAVGTSQTKAFETEETCLREARKILSGK
LKKGYIEKNDIIKNSVPTDNKRPKLDKENQKEVDKAVTPKIEKQSKSDSQKIEEQPKDKV
KQSSQKTTKQDSETLPSESLKELNRISLYYQGDGSDKVYHVNIDPKEDGYVVLFAFGRRG
STLQTGTKTSKPVSYESAQKIMNQLVNSKMSKGYTEGESGTPYLHSSKEERISGVHCQLL
NPIEEEELSVYIENDQYGAQEKLDGNRMMIRKTGDNVEGINRKGLIIATSQIICEYALGF
QEDFILDGESIGDVFYPFDIFSKDGRDIQHLSYRERYAILKSILKDRDKTFRLVELVVST
KDKKGLLEKLRENQKEGIVFKDLNAPYKAGRPASKGAQIKFKFYETATVSVETVNLKRSV
SMRLYDGKSWINVGNVTIPVNFEMPQEKDIIEVRYLYAYRGGSLYQPTYLGVRSDADEND
CDLNQLKYKNV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaacactacctgacttataaagatgatacgtcggacaaattttggagcatagaaatt
tcaggaaattcctttaccgttgtctatggcaaaataggcgctgtcggaacatctcaaacc
aaagcttttgaaaccgaggagacctgcctaagagaagcgcgtaagattctctctggaaaa
ttaaaaaagggttatatagaaaaaaatgatataatcaaaaattcggttcctactgataat
aagaggcccaaattagacaaagagaaccaaaaggaagtggataaagccgtaactccaaaa
attgaaaagcaatcgaaatctgattcgcaaaaaatcgaagaacaaccgaaggataaagtc
aaacagtcatctcaaaaaactacaaaacaagattcagaaactcttccatcagaaagtttg
aaagagttaaatagaatcagtctttattatcaaggcgacggtagtgacaaagtttatcat
gtaaatatagatccaaaagaggatggatacgttgttcttttcgcttttggtagacgcggg
agcactcttcaaaccggaaccaaaacctcaaaaccggtttcttacgaatccgctcaaaaa
attatgaaccaactcgtaaattccaaaatgtcaaaaggatatacggaaggagaatccgga
actccttatcttcattcaagcaaagaagaacgaataagcggtgttcattgtcaacttctc
aatcctattgaggaagaagaactttccgtgtatattgaaaacgatcaatatggagctcag
gaaaaattggacggcaatcgtatgatgatccgaaaaactggagacaacgtggaaggaatc
aatcgcaagggtttaattattgcgacttcgcaaatcatatgcgaatatgctctcggtttt
caggaggattttattctggatggagagtcgatcggagatgtattctatcctttcgatatt
ttttcgaaagacggaagagatattcaacatctgtcctaccgagagcgttatgcgatactt
aagtccatcctaaaggatagggacaaaacttttcgtctcgtcgaattggtcgtttctaca
aaagacaaaaaaggacttctcgaaaaattacgagaaaatcaaaaagaaggaatcgtattc
aaagatttgaatgctccttacaaagcgggtagacccgcgagcaaaggggctcagattaaa
tttaaattttacgagactgcaacggtaagcgtagaaacagtaaatctaaaacgtagtgta
agtatgcgtctttacgacggaaaatcttggattaatgttggaaacgtaactataccggtt
aatttcgaaatgccgcaagaaaaagacattatagaagtacgttatttgtacgcatacaga
ggaggttctttgtatcaacctacttatctgggagttcgaagcgatgcggacgaaaacgac
tgcgatttaaatcagcttaagtacaagaacgtttaa
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