Leptospira mayottensis: DPV73_09000
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Entry
DPV73_09000 CDS
T05598
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lmay
Leptospira mayottensis
Brite
KEGG Orthology (KO) [BR:
lmay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmay03009
]
DPV73_09000
Enzymes [BR:
lmay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DPV73_09000
Ribosome biogenesis [BR:
lmay03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DPV73_09000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
N6_N4_Mtase
Cons_hypoth95
TRM5-TYW2_MTfase
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
AXR68136
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All DBs
Position
I:1887383..1888564
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AA seq
393 aa
AA seq
DB search
MKPPMSQSCQHYPECAGCDQLHIGYEKQLQHKQERIEKRFVDFQGLEIRPIVKSPKEQKY
RHKVQLPFGHRKIGKKSVLTLGLHNKENTYIIDQKECRIQDADLTTVAAAIRHWARTENV
IPYNEKNGSGLLRHIVLRKANASQEILVGIVTNATEVPGRKKLADRLHSYIQQFLYNEKS
KAEIVGILQNVNQRNTKVVLGEKETTWYGRHFVKEKIGDLEFQIGLSTFFQVNPFQIENL
YDLVLEELPSDSNVVDAYCGIGTISLYVASKSKKVIGLEENPNSIRSAIGAAKANGIVNA
AFIKGKVLHSLQAALNEKTDVVILDPPREGLDPETKKILLSSKIHKILYVSCNPETLLRD
AVILTKVFKYTKMTPVDLFPHTSHLESVSVFTR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcccatgagtcagtcctgtcaacattatccggaatgcgccggttgtgatcaa
ttgcatatcggttacgaaaaacaacttcaacacaagcaggaaaggatcgaaaaacggttt
gtagatttccaaggacttgaaatccgaccgattgtaaaaagtccgaaggagcaaaagtat
cgtcataaggttcaacttccgttcggacatcgtaagatcgggaaaaaatcagttctcact
ttaggacttcataacaaagagaatacatacatcattgatcaaaaagaatgtagaattcaa
gatgccgacttaactaccgtggccgctgcgatccgacattgggcgcgtaccgaaaatgtc
attccctataatgagaaaaatggaagcgggcttttgagacatatcgtactcagaaaggcg
aacgcatcccaggagatattagtaggaatcgtgacgaatgcgaccgaagttcctggaaga
aaaaagcttgccgacagattacattcttacattcagcaattcttatataatgagaagtcg
aaagccgagatcgtgggaatactgcaaaatgtaaatcagagaaatactaaggtcgttttg
ggcgaaaaagaaacgacttggtacggaaggcattttgtaaaagaaaagatcggtgatctt
gaatttcagatcggactttccacgttttttcaagtgaatccgtttcagattgaaaatctt
tacgatctcgttttggaggaacttccgagcgattcgaacgtagtggatgcctattgtggg
atcggaacgatctccttatatgtcgcatccaaatccaaaaaagtgatcggactggaagag
aatccgaattcgatccgttccgcaattggagccgcaaaggcgaacggaatcgtaaacgcc
gcctttatcaagggaaaggttttacattctttacaggcggctttgaacgaaaaaacagat
gtagttattttggatcctccgagagaaggactcgaccctgagacgaaaaagatattatta
agttctaaaatacataagattctttacgtttcttgcaatccagagactctactaagggat
gcggttatacttaccaaagttttcaaatatacgaagatgactccggtggatttgttcccg
catacgagtcatctggaaagtgtttcggtttttacgagatga
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