KEGG   Leptospira mayottensis: DPV73_16215
Entry
DPV73_16215       CDS       T05598                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
lmay  Leptospira mayottensis
Pathway
lmay02024  Quorum sensing
lmay03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmay00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DPV73_16215 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DPV73_16215 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmay03019]
    DPV73_16215 (hfq)
   03036 Chromosome and associated proteins [BR:lmay03036]
    DPV73_16215 (hfq)
Messenger RNA biogenesis [BR:lmay03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DPV73_16215 (hfq)
Chromosome and associated proteins [BR:lmay03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DPV73_16215 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: AXR69339
LinkDB
Position
I:complement(3415518..3415766)
AA seq 82 aa
MSAKNNIQDQLLNTARKDKLDLTIYLLNGVPLKGKVVSFDNFTIVLEQENKQSLVYKHAI
STIIPAKIIKLYTEETKDAVQG
NT seq 249 nt   +upstreamnt  +downstreamnt
atgtctgctaaaaacaatatacaggaccaactcttaaatactgcccgaaaggataaattg
gatcttacgatttatcttctaaatggggttcccttgaaaggtaaggtagtaagtttcgat
aattttacgattgtgcttgaacaggaaaataaacaaagtcttgtttataaacacgcgatt
tccacgattattcccgctaagatcatcaagctctataccgaggaaacgaaagacgcagta
caaggataa

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