Marilutibacter maris: C9I47_0341
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Entry
C9I47_0341 CDS
T05495
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lmb
Marilutibacter maris
Pathway
lmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C9I47_0341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmb03019
]
C9I47_0341
Enzymes [BR:
lmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C9I47_0341
Messenger RNA biogenesis [BR:
lmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C9I47_0341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RhlB
ResIII
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AWV06066
UniProt:
A0A2U9T0E2
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All DBs
Position
440895..442640
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AA seq
581 aa
AA seq
DB search
MSDKPLTDVTFESFGLHPELLAGLEGAGFTRCTPIQAMTLPIALTGRDVAGQAQTGTGKT
LAFLVAVMNRLLTSPALAERKPEDPRALILAPTRELAIQIHKDAVKFGSDLGLKFALVYG
GVDYDKQRSILQEGADIIIATPGRLIDYVKQHKVVSLHACEVCVLDEADRMFDLGFIKDI
RFLLRRMPIRTERQTLLFSATLSHRVLELAYEHMNEPEKLVVEAETVTAARVRQKMYFPA
DEEKIPLLIGLLSRSEGTRTMVFVNTKVFVERVARALEKAGHRVGVLSGDVPQKKRETLL
GRFQKGQLDILVATDVAARGLHIDGVSHVYNFDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMSLPDIEAYIEQKIPVEPVDAELLVATPRAPRERAEGDDGESVSTIFREAREQR
AADEERRGGGRNRGRSGRGGGGGGGGRSRSGERGPRREGDEGERAARPPRTPKPVAEAAE
AASSVPNPAAEGEPAKKPRKRRRRRGGRRVEGAGEAAPAQGQAPRNNGGPTQVPANKPAA
AAKPRAASRPAEASADAKPGLLSRIGRGLKSLVTRAPRSQH
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataagcccctgaccgatgtcaccttcgagtcctttggcctgcatcccgagctg
ctggccggcctcgagggcgccggattcacccgatgcaccccgatccaggcgatgaccctg
ccgatcgccctgaccggccgcgatgtcgccggccaggcccagaccggcaccggcaagacc
ctggccttcctggtcgcggtgatgaaccgcctgctgaccagccccgccctggccgagcgc
aagcccgaggatccgcgcgcgctgatcctggcgccgacccgcgagctggcgatccagatc
cacaaggacgcggtgaagttcggcagcgacctgggcctgaagttcgccctggtctacggc
ggcgtcgactacgacaagcagcgttcgatcctgcaggaaggcgccgacatcatcatcgcc
accccgggccgcctgatcgactacgtcaagcagcacaaggtggtcagcctgcacgcctgc
gaggtgtgcgtgctggacgaggccgaccgcatgttcgacctcggcttcatcaaggacatc
cgcttcctgctgcggcggatgccgatccgcaccgagcgccagaccctgctgttcagcgcg
accctcagccatcgcgtgctcgagctggcctacgagcacatgaacgagccggagaagctg
gtcgtcgaggcggagacggtcaccgccgcgcgggtgcgccagaagatgtacttcccggcc
gacgaggaaaagattccgctgctgatcggcctgctctcgcgcagcgagggcacccgcacc
atggtgttcgtgaacaccaaggtgttcgtcgagcgggtcgcccgtgcgctggagaaggcc
ggccaccgggtcggcgtgctgtccggcgacgtgccgcagaagaagcgcgagaccctgctg
ggccgcttccagaagggccagctcgacatcctggtggcgaccgatgtcgccgcccgcggc
ctgcacatcgacggcgtcagccacgtctacaacttcgacctgccgttcgatgccgaggac
tacgtccaccgcatcggccgtaccgcgcgcctgggcgccgagggcgacgcgatcagcttc
gcctgcgagcgctacgcgatgagcctgccggacatcgaggcctacatcgagcagaagatt
ccggtcgagccggtcgacgccgagctgctggtggcgacgccgcgcgcaccgcgcgagcgg
gccgagggcgacgatggcgagagcgtgagcacgatcttcagggaggcgcgcgagcagcgc
gcggccgacgaggagcgtcgcggtggcggcaggaaccgtggccgcagcggtcgcggtggc
ggtggtggtggtggcgggcgttcgcgcagcggcgagcgcggcccgcgccgcgagggcgac
gagggcgagcgcgccgcgcgtccgccgcggaccccgaagccggtggccgaggcagccgag
gcggcctcgagcgtgccgaacccggcggccgagggcgagccggcgaagaagccgcgcaag
cgccgtcgccgtcgcggtggccgccgtgtcgagggcgcaggcgaggccgcgcccgcgcag
gggcaggcgccgcgcaacaacggtgggccgacccaggtgccggccaacaagccggccgca
gccgccaagccgcgcgccgcttccaggccggcggaggcctccgccgacgccaagccgggc
ctgttgagccgcatcggacggggtctgaagtcgttggtgacccgcgcgccgcgatcgcag
cactga
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