Marilutibacter maris: C9I47_1539
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Entry
C9I47_1539 CDS
T05495
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmb
Marilutibacter maris
Pathway
lmb03410
Base excision repair
lmb03430
Mismatch repair
lmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C9I47_1539
03430 Mismatch repair
C9I47_1539
03440 Homologous recombination
C9I47_1539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmb03400
]
C9I47_1539
DNA repair and recombination proteins [BR:
lmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C9I47_1539
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C9I47_1539
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C9I47_1539
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AWV07240
UniProt:
A0A2U9TGE0
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All DBs
Position
1908140..1909855
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AA seq
571 aa
AA seq
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MKPRTRLQRREAPAAGEWSARVPALLRRIYAARGALDEAQARPRLAQLPPPDGLVGVDAA
AELLATAIAEDRHIVVVGDFDCDGATACALGVRGLRMLGARRVSHAVPNRIVHGYGLSPA
LVDELAALQPDLLVTVDHGIACHAGIAAAKARGWQVLVTDHHLPGETLPAADVIVDPNQP
GDRFPGKMLAGVGVMFYVLLALRRHLHDRPDSDARTRPDLTALLDLVAVGTVADLVPLDA
CNRALVAAGLRQLRAGRGCAGLQALIEVSNRDAARLTAADIGFAVGPRLNAAGRLEDMSL
GIECLLTDDPRQAREIAATLNEINGERRAVQQQMTDEAEAAVARVALAGEPPLAVCLHDP
QWHPGVVGLVASKLKERLHRPVIAFAPAEPGSDALRGSARSIPGFHIRDALAAVDARHPG
LVERFGGHAMAAGLSLPMARLEAFRDAFARVAAETLGPELLQAVVLSDGDLAADEFTRVN
AEALRDGGPWGQGFPEPQFDGEFDVLGWRVVGERHLKLELGHGRQRLNAIHFGSWDGQAP
PGRVRIAYRLEPDDYRGGDAVQLVVVHREAV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgcggacccgtctgcagcgccgcgaggcgccggcggccggcgagtggtcggcg
cgggtgccggcgctgctgcgccgcatctacgccgcgcgaggcgctctcgacgaggcccag
gcacgcccacggctcgcccagttgccgcctccggacggcctggtcggcgtcgacgccgcg
gccgagctgctggcaacggccatcgccgaggatcgtcacatcgtggtggtcggggatttc
gactgcgacggcgccaccgcctgcgcgctgggcgtgcgcggcctgcgcatgctcggtgcg
cgccgggtctcgcacgcggtacccaaccggatcgtccacggttacgggttgtcgccggcg
ctggtcgacgagcttgccgcgctgcagcccgacctgctggtcacggtcgatcacggcatc
gcctgccacgccggcatcgccgcggccaaggcgcgcggctggcaggtcctggtcaccgat
caccacctgcccggcgagaccctgccggcggccgacgtgatcgtcgatcccaaccagccc
ggcgaccgttttcccggcaagatgctggccggggtcggggtgatgttctacgtgttgctg
gcgctgcgccggcaccttcacgaccgtcccgacagcgatgcgcggacgcgtccggatctg
accgcgctgctggacctggtcgcggtcggtaccgttgccgacctggtgccgctggacgcc
tgcaaccgcgccctggtcgcggccggcctgcggcagttgcgcgcggggcggggctgcgcc
gggctgcaggcgctgatcgaggtgtccaaccgcgacgccgcgcgcctgaccgccgccgac
atcggtttcgcggtcggcccgcgcctgaacgccgccggccgcctggaggacatgtcgctg
ggcatcgagtgcctgctgaccgacgacccgcgccaggcccgcgagatcgccgcgacgctg
aacgagatcaacggcgagcgtcgcgcggtccagcagcagatgaccgacgaggccgaggcc
gccgtggcccgggtcgcgctggccggcgaaccgccgctggcggtctgcctgcacgatcct
cagtggcatcccggggtggtcggcctggtcgcctccaagttgaaggagcgcctgcaccgg
ccggtgatcgcgttcgcgccggccgagccgggcagcgacgccctgcgcggttcggcgcgc
tcgattcccggcttccatatccgcgatgcgctggcggcggtcgacgcgcgccatcccggc
ctggtcgagcgtttcggcggtcatgcgatggcggccggcctgtcgttgccgatggcgcga
ctggaggcgttccgcgacgcgttcgcgcgggtcgccgccgagaccctgggcccggagttg
ctgcaggccgtggtgctcagcgacggcgacctggcggcggacgagttcacccgcgtcaat
gccgaggccctgcgcgacggcgggccgtgggggcagggcttccccgagccccagttcgat
ggcgaattcgacgtgctcggctggcgggtggtcggcgagcgtcacctgaagctggagctc
ggccatggccgccagcgcctgaatgccatccacttcggcagctgggacgggcaggcgccg
cccggccgcgtgcgcatcgcctatcggctcgagcccgacgactatcgtggcggcgacgcg
gtgcaactggtggtggtgcaccgcgaagcggtctga
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