Marilutibacter maris: C9I47_2503
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Entry
C9I47_2503 CDS
T05495
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmb
Marilutibacter maris
Pathway
lmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C9I47_2503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmb03019
]
C9I47_2503
03400 DNA repair and recombination proteins [BR:
lmb03400
]
C9I47_2503
Enzymes [BR:
lmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C9I47_2503
Messenger RNA biogenesis [BR:
lmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C9I47_2503
DNA repair and recombination proteins [BR:
lmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C9I47_2503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AWV08181
UniProt:
A0A2U9T6K0
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All DBs
Position
3068498..3070348
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AA seq
616 aa
AA seq
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MRMENAALDLLRTVFGHADFRGEQAEIVEHVADGGDALVLMPTGGGKSLCYQLPAMLRDG
CAIVVSPLIALMQDQVEALHQQGVRAACLNSTLDAETAAKIEREWLDGDLDLLYVAPERL
LGGRMLGLIERAHARGQVALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPDVPRIALTA
TADAPTRREIVERLALDDARQFVSSFDRPNIRYTVVHKDGGGIRQLLDFLRRHDGESGIV
YAFSRRRVETVAEQLVEAGIHALPYHAGLPAETRAANQRHFLQADGVVMVATIAFGMGID
KPDVRFVAHIDLPKSIEGYYQETGRAGRDGAAAEAWMSYGLGDVVNLRALIDQGEASDER
KQLERGKLDALLGYCETTQCRRRNLLAWFGEHYEVGKAGCGGCDNCLEPPETWDGTVAAR
KALSAVYRSGQRFGAGHVIDILTGKTTDKVSQYGHDRLSTWAIGSDLDARQWRGVFRQLL
AAGLLEADAERYNALRLTATAGPVLRGEQSLSFRREPEPRSRRGRRGSSSMLEAELDSDA
LARFRALREWRSELAREQSVPAYVIFHDSTLRAIAEADPSDARDLAGIPGIGERKLERYG
DDLLDHLARSAPGSAA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatggagaatgccgcgctcgacctgcttcgcaccgtttttggacacgccgacttc
cgtggcgagcaggccgagatcgtcgagcacgtcgccgacggcggcgatgcgctggtgctg
atgccgaccggtggcggaaagtcgctgtgctaccaattgccggcgatgctgcgcgacggc
tgcgcgatcgtggtctcgccgctgatcgcgctgatgcaggaccaggtcgaggccctgcac
cagcaaggggtgcgcgcggcctgcctgaactcgaccctggacgccgaaaccgcggcgaag
atcgagcgcgaatggctcgacggcgacctcgacctgctctacgtcgcccccgagcgcctg
ctcggcggacgcatgctggggctgatcgagcgcgcccacgcgcgcggccaggtcgccctg
ttcgcgatcgacgaggcccattgcgtatcgcagtggggccacgacttccgccccgagtac
cgccagctgaccgtgctgcacgagcgctggcccgacgtgccgcggatcgcgctgaccgcg
accgccgacgcaccgacccggcgcgagatcgtcgaacggctggcgctggacgacgcccgc
cagttcgtcagctcgttcgaccgtcccaacatccgctacaccgtcgtccacaaggacggc
ggcggcatccgccagctgctggacttcctgcgccgccacgacggcgagagcggcatcgtc
tacgcgttctcgcgccgccgcgtcgagaccgtggccgaacaactggtcgaggccggcatc
cacgccctgccctaccacgccggcctgccggcggagacccgcgccgccaaccagcgccat
ttcctgcaggccgacggcgtggtgatggtggcgacgatcgccttcggcatgggcatcgac
aagcccgacgtgcgcttcgtcgcccacatcgacctgcccaagtcgatcgagggctactac
caggagaccggtcgcgccggccgcgacggcgccgccgccgaggcctggatgagctacggg
ctcggcgatgtggtcaacctgcgcgccttgatcgaccagggcgaggccagcgacgagcgc
aagcagctcgaacgcggcaagctcgacgccctgctcggctattgcgagaccacccagtgc
cgccgccgcaacctgctggcctggttcggcgagcactacgaggtcggcaaggccggctgt
ggcggctgcgacaactgcctggagccgccggagacctgggacggcaccgtcgccgcgcgc
aaggcgctgtcggcggtctaccgcagcggtcagcgcttcggcgccggccacgtgatcgac
atactcaccggcaagaccaccgacaaggtgagccagtacggccacgaccggctcagtacc
tgggcgatcggcagcgatctcgacgcccgccaatggcgcggggtattccgccagctgctc
gccgccggcctgctggaggccgacgccgagcgctacaacgcgttgcggctgaccgcgacg
gccggaccggtgctgcgcggcgagcagtcgctgtcgttccggcgcgagcccgagccgcgc
tcccgtcgcggccggcgcggcagctcgtcgatgctggaggccgaactcgacagcgatgcg
ctggcccgcttccgggcattgcgggaatggcgctcggagctggctcgcgagcagagcgtg
cccgcctacgtgatcttccacgacagcaccctgcgcgcgatcgccgaggccgacccgagc
gacgcccgcgacctggccggaatccccgggatcggcgaacgcaagctcgagcgctacggc
gacgacctgctcgaccacctggcccgctccgcgcccggctccgccgcctga
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