Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_00253
Help
Entry
Lm4b_00253 CDS
T00898
Name
(GenBank) Putative DNA repair protein Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmc03400
]
Lm4b_00253
DNA repair and recombination proteins [BR:
lmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Lm4b_00253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_5
Rad51
RecA
AAA_24
AAA_14
AAA_22
AAA_16
nSTAND3
SLFN-g3_helicase
AAA
ATPase_2
ABC_tran
Elong_Iki1
NTPase_1
DUF2642
divDNAB
zf-RING_10
DUF7125
NPHP3_N
AAA_30
DZR
KTI12
DAP3
AAA_10
NACHT
DUF7129
Motif
Other DBs
NCBI-ProteinID:
CAS04021
LinkDB
All DBs
Position
249806..251179
Genome browser
AA seq
457 aa
AA seq
DB search
MAKAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVEALEPSKKSRSAFNHTGEPSKATP
ITQIASETEKRVETNMPELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQLTLTNKK
VLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAVQETIDFVKPDFVVIDSIQTVYH
PDVTSAAGSVSQVRECTATLMRIAKMQNIAIFIVGHVTKEGAIAGPRLLEHMVDTVLYFE
GERHHAYRILRAVKNRFGSTNEMGIFEMRDVGLVEVANPSEVFLEERLEGASGSTVVASM
EGTRPVLVEIQALVSPTMFGNAKRMATGIDYNKVSLIMAVLEKRVGLMLQNQDAYLKAAG
GVKLDEPAVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIRRVARIEQRVQEAAKLGF
KRIFIPKNNEGNWKIPKDVQVVGVETIGEALKKALPD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcaaaaaggacaaccaaatttgtgtgtcaggcatgtggatatgaatcggca
aaatggatgggaaaatgtccgaattgcaacgagtggaatcagatggtagaagctttggag
ccgtcaaaaaaatcacgctcagcttttaatcatacgggagaaccttcgaaagcgactcca
attactcaaatagcaagtgaaacagaaaaacgtgtcgaaaccaatatgccggagttaaat
agagttcttggcggaggtgtggttccaggatctatggtacttgtcggtggggatcctggt
atcgggaagtcgactttattactgcaagtttcagctcaactgacgctcacaaataaaaaa
gtattgtatatatcaggagaagaatctatcaaacaaacgaagctgcgggcggaacgcttg
caagtttcgggagataatttatatgtgtatgcagaaacaaatttagaagcagttcaagaa
acgattgattttgtgaagcctgattttgtagtcattgactccattcagactgtttatcat
cctgatgttacaagtgcagcggggagtgtttcgcaagttagggaatgtacagcgacattg
atgcgaattgctaaaatgcaaaacattgctatctttattgttggacatgtaacgaaggaa
ggtgctattgcggggccgcgcctacttgaacatatggttgatactgtgctttattttgaa
ggggagcgtcatcatgcttaccggattttgcgtgcagtgaaaaaccgttttggttccact
aatgaaatgggtatatttgaaatgcgagatgttggacttgtagaagttgctaatccttcc
gaagtgttcttggaagaacgtcttgaaggcgcttcaggttcaacggttgtagcttctatg
gaaggaactcgccccgtccttgtggaaatacaagcgcttgtttcgcctacgatgtttggt
aatgctaagcgaatggcgacaggaatagactataataaagtttcgctaattatggctgtt
ttagaaaagcgagtaggtttaatgttgcaaaaccaagatgcttatttgaaagcagctggt
ggggttaaattggatgaacctgcagtggatttggcggttgcagtcagtgttgcatctagc
tatcgtgataaaccaacaagaagtacggattgctttattggagaacttggacttacaggt
gagattcgtcgtgttgcaagaattgaacaacgcgtacaagaagccgcaaaacttggcttt
aagcgaatttttattcctaaaaataacgaaggtaattggaaaataccgaaagacgtgcaa
gtggttggggtggaaacgattggagaagctttgaagaaagctttaccagattaa
DBGET
integrated database retrieval system
