KEGG   Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_00543
Entry
Lm4b_00543        CDS       T00898                                 
Name
(GenBank) Putative HsdR type IC restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lmc  Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:lmc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lmc02048]
    Lm4b_00543
Enzymes [BR:lmc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Lm4b_00543
Prokaryotic defense system [BR:lmc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Lm4b_00543
SSDB
Motif
Pfam: SWI2_SNF2 ResIII T1R_D3-like HSDR_N DEAD SNF2-rel_dom AAA_22
Other DBs
NCBI-ProteinID: CAS04311
LinkDB
Position
552623..555610
AA seq 995 aa
MAEAKFEAALIKKLETEGWTYREDLSNVSIKKLEEHWRDILNETNAHKLNGVPLSEIEFG
LILQELQRIKTPYDAQLLLVGAGGVGSIPITRDDGSSLEVEIFYEDDVAGGRSRYEIVNQ
VRFDNLPKGLTTKRIIDVALLINGIPVVHIEEKDEHLQNQWRAFEQLKGYHGDGLYKGLF
AFVQVQVIMSQHSAHYFARPNAFEQYNKTFVFGWRDENNKDITDAFEFIHQVMSIPALHR
LVTVNMIPDASNDNIMVMRSYQIQATREILQRMKEMEASGLVQKEGGYIWHTTGSGKTVT
SFKVAQLLASAPRIKNVLFIVDRIDLIDQTLENFKSFAYAHFKNRIKKVNGRELKRELKR
KGSSQILLISVQGLTKAVKKGLENDDWNVIIMDEAHRSASGESVKLIKKALKKTTWFGFT
GTPNFYSDEINDVKTTREISTHDIFGKRLHTYTIKDAIGDGNVLGFDVTYFKPHWVVEHP
QEDFSEKDYEKEVYQSDVYRQEVVKDILDNWTKTSSGALIAGKREENAFQAMFAVSGKQA
AVNYYNIFKSKGSHLNVAMTFSRDESNEHGTKEQNEALKNAIKDYTEKFNVASILDAKDP
ARAYMLDITKRLARKRPYNQGKEEDRLDLVIVSDQLLTGFDSKFINVIYMDKMLKEGMLI
QAISRTNRTFDLNSKPHGKVRFYRQGDEMREFVENALRIYTRGGNDTLQEAEEETKNQLP
KDLENDDILAKPQSHQINELEEAILRLKELAGDDFSQVPRGQNDLKEFVGLALTTQTKIQ
QLIQQGYELGSEIEELNEQGEATGRMVRLNISSIDEFGALQARLYDAKEKLPPEERPDLT
EIKIGIEFYHHEIIDYDMLVELLNTFMDEKNKSNKDAIEKHIVPMDEESQHEIHGIVDDI
EAGHITEHFTTDSLQETRKKYRTEHRELKVRRWAANQKVNGNRIVEAFDLFLPGHTLIDN
PKLADIVREIEEEENIGFFEASDFEEELMAFFNSL
NT seq 2988 nt   +upstreamnt  +downstreamnt
gtggcagaagcaaaatttgaagcagctttaattaaaaagcttgaaactgaaggatggact
tatcgggaagatttatccaatgttagtattaaaaaacttgaagagcattggcgtgatatc
ttaaatgaaactaacgctcataaactcaatggagtaccattgtcagaaattgagtttgga
ttaattcttcaagaattacaacgtattaaaacaccgtatgatgctcaattattattagtg
ggtgcaggtggagtagggtcaattcctattactcgtgatgatggttcaagcctggaagtt
gaaattttttatgaagatgatgtagcgggcgggcgctctcggtatgaaattgtcaatcaa
gtaagatttgataatctacctaaaggattaacaacaaaacgtataattgatgtagcttta
cttattaatggtattccagtagttcatattgaagaaaaagatgagcatttacaaaatcag
tggcgagcttttgaacaactcaaaggttatcatggtgacggactgtataaaggattgttt
gcttttgtacaagttcaagttatcatgagtcaacattcggcgcattattttgctcgtcca
aatgcatttgaacaatataataaaacttttgtgtttggctggcgggacgaaaataataaa
gatattacggatgcatttgaatttattcatcaagtaatgagtatccctgctctccaccgc
ttagttacagttaatatgatcccggatgcgtcaaatgataacataatggtaatgcgcagc
taccaaattcaagcaacaagagaaattttacaacgcatgaaagaaatggaagcaagcgga
cttgtgcaaaaagagggcgggtatatatggcatacaactggatcaggcaagacagttact
tcctttaaggttgcacaactcttagcgtctgcacctagaattaaaaatgtactatttatt
gtggatcgtattgacttaatagaccaaacactcgaaaattttaaaagtttcgcatatgct
cactttaaaaatcgcattaagaaggttaatggaagagagttaaagagagaattaaagaga
aaaggctcctcgcaaattttattgatttcagttcaaggattgacaaaagctgttaaaaaa
ggtttagaaaatgacgactggaatgtcattattatggatgaggcgcaccgaagcgcgagt
ggagaatctgtaaagttaatcaaaaaggcactcaagaagacaacttggttcgggttcacg
ggcactccgaacttttacagtgatgaaataaatgatgtcaaaacaactcgagaaatttca
acgcatgatatatttggcaaacgactacatacatataccattaaagatgctattggcgac
ggaaatgtcttaggatttgatgtaacttatttcaaacctcattgggtggttgaacatcca
caagaagacttttctgaaaaagactatgaaaaagaagtttatcaaagtgatgtctatcgt
caagaagtcgtaaaagatatccttgataactggacgaaaacatctagtggggctttaatt
gcaggtaaacgtgaagagaatgccttccaagcgatgtttgcagtgtcaggtaagcaagca
gctgtgaattattataatattttcaaatcgaaaggatctcatttaaatgtagcaatgaca
ttttcacgtgatgagtctaatgaacatggtacaaaggaacaaaatgaggcgcttaaaaat
gcgattaaagactatactgaaaaattcaatgttgcaagcattttagacgcaaaggatcca
gctcgagcttacatgttggatataactaagcgattagcacgtaaaagaccatataatcaa
ggtaaagaagaagatagattagatttagtaattgtttcagatcagcttttaacaggcttt
gattcaaagttcatcaacgtaatctacatggacaaaatgctcaaagaaggaatgctaata
caggcgatttctagaacaaatcgaacttttgaccttaatagcaaaccacatgggaaagta
cgtttttatcgccaaggtgatgaaatgcgcgaatttgttgaaaatgcgctacgtatttat
acgagaggtggcaatgatactcttcaagaagcggaagaagagacaaaaaatcagctgcct
aaagatttagaaaatgacgatattcttgcaaagccccagagccaccaaatcaacgaacta
gaagaagctatcttaagattgaaagagcttgctggcgatgattttagtcaagttccacga
ggccaaaatgatctaaaagaatttgttggtcttgctttaactactcaaaccaagatccag
caattaatccaacagggttatgagctaggaagcgagattgaggagctaaatgaacaaggt
gaagcgactggaagaatggttcgtttgaacatttcaagtattgatgaatttggtgcttta
caagctcgtttatatgatgctaaggagaaattacctcctgaagagcgtccagatctcact
gaaataaagattggaattgaattttatcatcacgagataattgactatgatatgttagtt
gagcttctgaatacctttatggacgaaaaaaataaaagtaataaagatgctatcgaaaaa
cacatcgtaccaatggatgaagaaagtcaacatgaaatccatggaatcgtggatgatatt
gaagcaggtcatatcacagaacattttacaaccgattctcttcaggaaacacgtaagaaa
taccgcacggaacatcgagagcttaaagttcgccgttgggcagctaaccaaaaagtcaat
ggtaatcgtattgtagaagctttcgacttattcctaccagggcatacgcttattgataat
ccaaagctagcggatattgtgcgtgagattgaagaagaggaaaatatcggattttttgaa
gcctctgattttgaagaagagctaatggcattcttcaattcactataa

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