Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01075
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Entry
Lm4b_01075 CDS
T00898
Symbol
PdhD
Name
(GenBank) Putative dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Pathway
lmc00010
Glycolysis / Gluconeogenesis
lmc00020
Citrate cycle (TCA cycle)
lmc00260
Glycine, serine and threonine metabolism
lmc00280
Valine, leucine and isoleucine degradation
lmc00310
Lysine degradation
lmc00380
Tryptophan metabolism
lmc00620
Pyruvate metabolism
lmc00630
Glyoxylate and dicarboxylate metabolism
lmc00640
Propanoate metabolism
lmc00670
One carbon pool by folate
lmc00785
Lipoic acid metabolism
lmc01100
Metabolic pathways
lmc01110
Biosynthesis of secondary metabolites
lmc01120
Microbial metabolism in diverse environments
lmc01200
Carbon metabolism
lmc01210
2-Oxocarboxylic acid metabolism
lmc01240
Biosynthesis of cofactors
Module
lmc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lmc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Lm4b_01075 (PdhD)
00020 Citrate cycle (TCA cycle)
Lm4b_01075 (PdhD)
00620 Pyruvate metabolism
Lm4b_01075 (PdhD)
00630 Glyoxylate and dicarboxylate metabolism
Lm4b_01075 (PdhD)
00640 Propanoate metabolism
Lm4b_01075 (PdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Lm4b_01075 (PdhD)
00280 Valine, leucine and isoleucine degradation
Lm4b_01075 (PdhD)
00310 Lysine degradation
Lm4b_01075 (PdhD)
00380 Tryptophan metabolism
Lm4b_01075 (PdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Lm4b_01075 (PdhD)
00670 One carbon pool by folate
Lm4b_01075 (PdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmc04147
]
Lm4b_01075 (PdhD)
Enzymes [BR:
lmc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Lm4b_01075 (PdhD)
Exosome [BR:
lmc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Lm4b_01075 (PdhD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
FAD_oxidored
HI0933_like
AlaDh_PNT_C
NAD_binding_8
Thi4
3HCDH_N
UDPG_MGDP_dh_N
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
CAS04841
LinkDB
All DBs
Position
1083861..1085264
Genome browser
AA seq
467 aa
AA seq
DB search
MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALIT
IGHRFKEAGHSDNMGITADNVNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAF
FVDDHSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYGKRVLSSTGALALTEVPKKLV
VIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALA
KSAEETENGVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDK
QGRSNVPNIFAIGDIVPGVPLAHKASYEAKIAAEAIAGEKAENDYTALPAVVFSDPELAT
VGLTEKEAKEKGFDVKAAKFPFGGNGRALSLDAPEGFVRLVTRKEDGLVIGAQVAGMNAS
DIISEIGLAIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggcgattttccagaagaaagagacaccatagtcatcggtgcaggcccaggt
gggtatgtagccgcaatccgagctgcacaactcggacaaaaagttaccattattgaaaaa
gaatattacggcggtgtgtgcttaaacgtgggatgtattccttccaaagcacttatcaca
atcggtcaccgttttaaagaagctggacactctgataacatgggtattacagcagacaac
gtgaacttagatttcacaaaagcacaagaatggaaaggcggcgtagttaacaagcttaca
tcaggtgttaaaggccttcttaagaaaaataaagttgaaatgttagaaggagaagcgttc
ttcgtggatgatcattccttacgtgtgatccaccctgactccgctcaaacttatacattc
aacaacgtaatcattgcaacaggatctcgtccaatcgaaatcccaggtttcaaatatggt
aaacgtgtattaagctcaactggtgcacttgcactaacagaagttccgaaaaaactagtc
gtaattggtggcggatatatcggaacagaactaggtggagcattcgctaaccttggtaca
gaactaactatccttgaaggtggtccagaaatcttaccaacatacgaaaaagacatggtt
tccctagttaaacgtaatctgaaaagcaaaaacgttgaaatggttactaaagcacttgca
aaatctgctgaagaaactgaaaacggcgttaaagtaacgtatgaagctaacggtgaaact
aaaactatcgaagctgattatgttttagtgacagtaggtcgtcgcccaaatacagacgaa
atcggtttagaacaagctggcgttaaagtaacagaacgcggtttagtagaagttgacaaa
caaggtcgctcgaacgttcctaacattttcgcaattggtgacatcgttcctggtgttcct
ctagctcacaaagctagctatgaagcaaaaatcgctgctgaagcaattgctggcgaaaaa
gcagaaaacgattatacagcacttccagctgttgttttcagtgacccagaacttgcaaca
gttggtttaacagaaaaagaagcaaaagaaaaaggctttgatgtaaaagctgctaaattc
ccattcggcggtaacggtcgtgcgctttctttagatgcacctgaaggatttgttcgtcta
gttactcgtaaagaagatggcctagttatcggtgcacaagttgccggaatgaacgcttct
gatattatttcagaaatcggcttagcaatcgaatcaggtattacagctgaagacatcgcg
cttactatccatgctcatccatcccttggagagcttacaatggaagcagctgaacttgct
ttaggtcgtccaattcacatgtaa
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