Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01336
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Entry
Lm4b_01336 CDS
T00898
Symbol
truB
Name
(GenBank) Putative tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmc03016
]
Lm4b_01336 (truB)
Enzymes [BR:
lmc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Lm4b_01336 (truB)
Transfer RNA biogenesis [BR:
lmc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Lm4b_01336 (truB)
Prokaryotic type
Lm4b_01336 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6210
Motif
Other DBs
NCBI-ProteinID:
CAS05100
LinkDB
All DBs
Position
1340458..1341372
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AA seq
304 aa
AA seq
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MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVT
DEGKVYVAEITLGKSTTTEDATGETVMTKELADISADELQAALTKLTGKITQIPPMFSAV
KVNGKKLYEYARAGIEVERPSRQVDIYSLTRLDGEATLNEANPTFQLEISCGKGTYIRTL
AVMIGELLGYPAHMSKLERTRSGFFKKEDCLTLAEIDEMMQASDSSFLYPLEKGIESMAK
LVIDEEIHAKVLNGGLLPKSLFIEVENEPRAALIFKDKLTAIYKPHPEKNELWKPEKVIE
LHQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcattatcccactgtggaaagaacgcgggatgacaagtcatgattgcgttttt
aaattaagaaagattttacatacgaaaaaagttggacacactggcacgctggatccagaa
gtagagggtgtacttccaatttgtatcggccgtgcgacgaaactagcagaatacgtaaca
gatgaaggaaaagtctacgtagcagaaataactttaggcaaatcgactacaacggaagat
gcgactggtgaaacggttatgaccaaggaattagcagacatttccgctgatgaacttcaa
gccgcgctcactaaattgactggaaaaattactcaaattccccctatgttttctgctgta
aaagtcaatggcaagaaattgtatgaatatgcaagagctggtatagaggtggaacgccca
tccaggcaagtggatatttattcgttaactcgcttagatggcgaggctacgctaaatgaa
gcgaatccgacttttcagttagaaatatcttgtggaaaaggtacttatattcgcacactt
gcagttatgattggtgaattattaggatatccagcgcacatgtccaaactagaacggact
cgtagcggctttttcaaaaaagaagattgcttaacgctggcagaaattgacgaaatgatg
caagcgagtgatagcagctttttatatccacttgaaaaaggcattgaatccatggccaaa
ttagtgattgatgaagaaatccatgcgaaagttttaaatggcggccttttaccaaaatca
ttatttatagaggtagagaatgagcctcgtgccgcgcttattttcaaagataaattaaca
gcaatttacaaacctcatccagagaaaaatgaactttggaaaccagaaaaagtcatcgag
ttacatcaagcatag
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