Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01576
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Entry
Lm4b_01576 CDS
T00898
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Pathway
lmc03030
DNA replication
lmc03410
Base excision repair
lmc03420
Nucleotide excision repair
lmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lm4b_01576 (polA)
03410 Base excision repair
Lm4b_01576 (polA)
03420 Nucleotide excision repair
Lm4b_01576 (polA)
03440 Homologous recombination
Lm4b_01576 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmc03032
]
Lm4b_01576 (polA)
03400 DNA repair and recombination proteins [BR:
lmc03400
]
Lm4b_01576 (polA)
Enzymes [BR:
lmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lm4b_01576 (polA)
DNA replication proteins [BR:
lmc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Lm4b_01576 (polA)
DNA repair and recombination proteins [BR:
lmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Lm4b_01576 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lm4b_01576 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Enkurin
HHH_5
LTD
NYN_YacP
FeoB_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CAS05337
LinkDB
All DBs
Position
complement(1585519..1588146)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNLTPQQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEETKELKELS
FEIVTELKEKHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEVFRKW
VESDQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFTSVAIRHDYTE
VETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQLALMEDLELPL
TFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEK
LGLPAVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattaattgatggaaatagtattgcgaatcgcgccttttatgcttta
ccgcttttaaataatgataaaggtgtttacacaaatgcggtgtatggtttcgcaatgatg
ttgatgaatgtactcgaaaaagaaaaacctagccatgtgctcgttgcatttgatgctggg
aaaacaactttcagacatacaacatttaaaggttataaaggcggacgtcaaaaaacccca
agtgagttatctgaacagtttccattcatccgagaacttttaacggcgtatgatatcccg
caatatgaacttgccaattatgaggcagatgatattatcggaacattgacgaaaaaagcg
gaagcagacggaatggaagtagcaatcattaccggagaccgggacttaacgcaattagct
tctgaaaaaacaacggtttatattactaaaaaaggcatagccgatatggaaaccaacaca
ccagaaacactaaaagaaaaatacaatctgactcctcaacaaatcattgatatgaagggt
ttaatgggtgattcctccgataatattcctggtattccaggcgttggtgaaaaaactgcc
ttaaaactcttacatgaatttggtggaacggtggaaagtgtgttagagcatgccgaggaa
atttccggtaaaaaactaaaagaaaaagtactggaaaataaagaattagctattttaagt
aaagagttagctacaatcaatgtggattcaccgattgaatgcacggtcgaaagcacgaaa
tacgacggctatcaaacagaaaaagttatccctttattaaaagaaatgaattttacaaca
cttttgaaaaatatcgagggagatacaccagaagaaacgaaagaactaaaagagttgtct
tttgaaatcgtaacagaattaaaagaaaaacattttggtgggaaaaccgcgctttatgtg
gagctagaaaacgataattaccatacagctaatttcattggattaacagtacattctagc
caagggacgtatttctttacaaaagaaacagccgaaagtagtgaggtattccgcaaatgg
gtagaaagtgatcaaacaaaagtagtgtatgatgcgaagaaaacaatggttgcaatgaac
cgcattggtttggccatttctggtatcacctttgatatcatgttagcatcttacttgcta
aatccatctgattcgattgatgactttacaagtgttgcaatacgacatgattacacagaa
gtagaaacagatgaagcagtctacggaaaaggtgctaaacgtagcactcctgaagaaagc
attgttgcggcacacttagctagaaaagcagtggctattgctgacttagagaaaagacta
gttgatgatttagaagaaaatgaacaactagctttgatggaagaccttgagctacctcta
acttttgtattagcagaaatggaaatgcaaggggttagtgtagatacagaacgtctagag
aatatgaaagtggagctagcgggtagactgaaaacattggaagagtcgatccattctcta
gccggcgaagaattcaatattaattcaccgaaacaactaggtgtgattttatttgaaaag
cttggtctcccagctgtcaagaaaacaaaaacaggttattcaacggctgccgatgtactg
gaaagtttatctggtaaacacgcgattattgatgaaattttgttatatcgtcaacttggt
aaaattcagtccacttatatcgaagggctgcttaaagtgacagataaagaaacacataaa
gtacacacacgtttcaaccaaacattaacgcaaacaggacgcttaagttcagttgatccg
aacttgcaaaatatccctattcgtttagaagaaggacggaaaattagacaagttttcgta
ccgagtaaaccaggttggaaaatgttttcagccgattattctcaagtagagctgagagtc
ttagcacatatttcggaagatgaaaatttaatttatgcatttaagcacgattatgatatt
catacgaaaacggcgatggacgtgtttcatgttgagcaagacgaagtggattcattaatg
cgtcgtcaggctaaagcggtaaactttggtattgtatatggaattagtgattatgggctt
tcgcaaaaccttggtattacgcgtaaagaagcaaaagactttattgatcgttattttgtg
agctatccagctgtgaaagaatatatgcaagatatcgttcgttttgcgaaagaaaaaggc
tatgtagagaccattttacatcgtcgtcggtatattccagagattgtcagtcgtaatttt
aatgttcgcggatttgcagaaagaacggcgatgaacacgcctattcaaggtagtgccgct
gatattatcaaaaaagcgatgattctgatgagcgagcgtttagtatctgaaaaattagaa
gcaaaattattactacaagtacacgatgaattaatcttcgaggcgcctgaagctgaaatc
gctaaattagaagaaattgtcccagatgttatggaaaatgcagtagagctttctgtaccg
ctaaaagtagatagcgcatttggtgacacttggtacgacgcgaaataa
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