Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01650
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Entry
Lm4b_01650 CDS
T00898
Name
(GenBank) Putative dna-3-methyladenine glycosidase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Pathway
lmc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lm4b_01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmc03400
]
Lm4b_01650
Enzymes [BR:
lmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Lm4b_01650
DNA repair and recombination proteins [BR:
lmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Lm4b_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
CAS05411
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All DBs
Position
complement(1667349..1667930)
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AA seq
193 aa
AA seq
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MSEELRCPWSINDPFELEYHDTEWCVPSKDDTYLFEMLNLEGAQAGLSWRLILHKRKAYQ
EAFFHFDIDKCARLTDDELATIVEEAAIVKNRLKVKAVRTNALATQKVQAEFGSFANYIW
GFTNNDRIINEWQGMGEVPASTELSEKISKDLKKRGFKFVGPVIVYSYLQAIGILDDHLR
SCPFHTFNREATK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaagaattacgttgcccttggtcgattaatgacccgtttgaactagaatatcat
gatacagaatggtgtgttccgagtaaagacgacacatatttatttgaaatgctcaattta
gagggagcacaagctggactctcatggagattaattttacataaaagaaaagcctatcaa
gaagctttttttcactttgatattgataaatgtgcacgcctaacagacgatgagctggcg
acgattgtcgaagaagcggctattgtaaagaatcgccttaaagtgaaagcagttcgtaca
aatgccctagctacgcaaaaagtccaagctgaattcggctcatttgcaaactatatttgg
ggttttacgaataatgaccgtattattaatgaatggcaaggcatgggagaggtccctgca
agcacagaactatcagaaaaaatcagtaaagatttaaagaaacgtggttttaagtttgtt
ggccctgtaattgtgtattcttatttacaagctattgggattttggatgaccatttacgt
tcatgcccatttcatacatttaatagggaggcgacgaaatga
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