Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01652
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Entry
Lm4b_01652 CDS
T00898
Symbol
citB
Name
(GenBank) Putative aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Pathway
lmc00020
Citrate cycle (TCA cycle)
lmc00630
Glyoxylate and dicarboxylate metabolism
lmc00640
Propanoate metabolism
lmc00720
Other carbon fixation pathways
lmc01100
Metabolic pathways
lmc01120
Microbial metabolism in diverse environments
lmc01200
Carbon metabolism
lmc01210
2-Oxocarboxylic acid metabolism
lmc01230
Biosynthesis of amino acids
Module
lmc_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Lm4b_01652 (citB)
00630 Glyoxylate and dicarboxylate metabolism
Lm4b_01652 (citB)
00640 Propanoate metabolism
Lm4b_01652 (citB)
09102 Energy metabolism
00720 Other carbon fixation pathways
Lm4b_01652 (citB)
Enzymes [BR:
lmc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
Lm4b_01652 (citB)
4.2.1.99 2-methylisocitrate dehydratase
Lm4b_01652 (citB)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
CAS05413
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All DBs
Position
complement(1668276..1670978)
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AA seq
900 aa
AA seq
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MTNWKEKAKASFQLNDKTYHYYKLKTLEEDKLTNIEKLPYSVRVLLESVLRQADGKVIKD
SHVEDLAHWSKDGNEGEVPFKPARVILQDFTGVPAVVDLASLRKAMADLGGDPEKINPEI
PVDLVVDHSVQVDSYANPEALKINMELEFKRNMERYQFLNWAQKAFDNYRAVPPATGIVH
QVNLEYLANVVIANEVADGEFVAFPDSLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQ
PSYFPIPEVIGVKLLGALPNGATATDFALKVTQVLREQKVVGKFVEFYGPGVATLPLADR
ATVANMAPEYGATCGFFPVDKEALNYLKLTGRDKEQIELVEAYLEANDLFFTPEKVEPNY
TQIVEIDLSAIEPNLAGPKRPQDLIPLSKMKETFRESITAKAGNQGFGLDKSALDKEVTV
TFGNGDQSTMKTGSVAIAAITSCTNTSNPYVMLSAGLVAKKAVEKGLEVPKFVKTSLAPG
SKVVTGYLEKAGLLPYLEKLGFDLVGYGCTTCIGNSGPLKEEIEEAIQDSDLLVSAVLSG
NRNFEGRIHALVKANFLASPPLVVAYALAGTTNVDMLTEPIGRGNNGEEVFLDDIWPSSE
EVKALVEETVTPELFREQYAHVFDENEAWNAIETTEDALYKWDENSTYIANPPFFDNLAK
EAGKVESLSGLRVIGKFGDSVTTDHISPAGAIGKDTPAGKFLQEEGVAIRDFNSYGSRRG
HHDVMMRGTFANIRIKNQIAPGTEGGYTTYWPTGEVMSIYDASRKYIENNTGLVILAGDD
YGMGSSRDWAAKGTNLLGIKTVIAKSYERIHRSNLVMMGVLPLQFQPGEDAETLGLTGSE
SLQVEIGEEVAPRDFVKVTAVREDGSSFTFEALARFDSEVEIDYYRHGGILPMVLRGKLK
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgactaattggaaagaaaaagcaaaagcatcatttcaactaaacgacaaaacgtatcat
tattacaaacttaaaaccttagaagaggacaagcttacaaacatcgagaaattaccttat
tctgtacgtgttttacttgaatccgttttaagacaagcagatggcaaagtaattaaggac
tcacatgtagaagatttagcccattggtctaaagatggaaacgaaggcgaagtaccattc
aaaccagcccgtgttattttacaagatttcacaggcgttccagcagtcgttgatttagct
tctttacgtaaagcaatggcggaccttggcggcgatccagaaaaaatcaatccggaaatc
ccagttgacttagtagtcgatcactcggtacaagtagacagctatgcgaatccagaagca
ctgaaaatcaatatggaactcgaattcaagcgcaacatggaacgttaccagtttttaaat
tgggcgcaaaaagcatttgataactatcgcgcagtaccacctgcaacaggtatcgttcac
caagttaacttagagtatttagcaaacgtcgttattgcgaatgaagtagcagacggcgaa
tttgtagcgtttccagattcccttgtcggaacagatagccatacgacgatgattaacggt
attggtgtattaggttggggcgtgggcggtattgaagcagaagccggcatgctcggtcaa
ccatcttacttcccaattccagaagttatcggtgtgaaattgctaggtgctttaccaaac
ggcgcaacagcaactgattttgctttaaaagtaacccaagtcttacgggaacaaaaagta
gtaggtaaatttgttgaattttatggtccgggtgttgcgacacttccgcttgctgaccgt
gcaaccgttgcgaatatggctccagaatacggtgcaacttgtgggttcttcccagtagat
aaagaagcccttaattatttaaaactaactggccgtgacaaagaacaaatcgaattagta
gaagcttatttagaagcaaacgatttattcttcacacctgaaaaagtagaaccaaactac
acgcaaatcgtggaaatcgatctttccgcgattgaaccaaacttggcggggccaaaacgt
ccccaagatttgatccctctttcgaaaatgaaagaaacattccgggaatcgattactgcc
aaagcaggcaaccaaggtttcggactagataaatcagccttagacaaagaagtaaccgtt
acttttggcaatggcgatcaatccactatgaaaactggttcggttgcaatcgcggcgatt
acaagttgtacgaacacttctaacccatatgttatgttaagcgctggtttagttgctaaa
aaagcagtcgaaaaaggcttagaagtaccaaaattcgtaaaaacatccttggcgccaggc
tctaaagttgtaacaggttacttggaaaaagccggcttacttccatatttagaaaaactt
gggtttgaccttgttggctatggttgtacgacgtgtatcggtaattctggtccattaaaa
gaagaaattgaagaagcaatacaagacagtgatttgcttgtttctgcggtattaagtggt
aaccgtaactttgaagggcgtattcatgcacttgtgaaagcaaacttcctagcttcacca
ccactagtcgttgcctatgcgctcgctgggacaacaaatgtcgacatgctaacagaacca
attggacgcggtaataatggcgaagaagtcttcttagacgatatttggccaagttcagaa
gaagtgaaggcattagtagaagaaacggtaacaccagaacttttccgtgaacaatatgct
catgtatttgatgaaaacgaagcttggaatgcgattgaaacaacagaagatgccctatac
aaatgggatgaaaactctacgtatattgcgaacccaccattctttgataatttagcgaaa
gaagctggcaaagtagaaagcttatctggcctccgcgttattggtaaatttggtgattct
gttacaaccgatcatatttcaccagccggagcaatcggcaaagataccccagctgggaaa
ttccttcaagaagaaggcgtggcaattcgtgatttcaactcatacggttctcgtcgtggt
catcatgatgtgatgatgcgcgggacatttgcgaatattcgtattaaaaatcaaatcgca
ccaggtacagaaggtggctatacgacttactggccaactggcgaagtgatgtcaatttat
gatgcttctagaaaatatatcgaaaataatactggtttagtcattcttgctggtgacgat
tatggaatgggatcctctcgtgactgggctgccaaaggaacgaacttgctaggaattaaa
acagttatcgcgaaaagctatgaacggattcatcgttctaaccttgtcatgatgggtgtt
ttaccacttcagttccaaccaggcgaagacgcagaaacgcttggcttaacaggctcagaa
agcttacaagtggaaatcggtgaagaggtagcgccaagagactttgtaaaagtaacagct
gtccgtgaagacggctcaagcttcacttttgaagcacttgcacgttttgactctgaagta
gaaattgactattaccgtcacggcggaattttaccaatggttcttcgtggcaaattgaaa
taa
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