Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01655
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Entry
Lm4b_01655 CDS
T00898
Name
(GenBank) Putative SNF2-type helicase
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
TetR_C_44
Motif
Other DBs
NCBI-ProteinID:
CAS05416
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Position
complement(1672382..1675600)
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AA seq
1072 aa
AA seq
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MEHFTAIQNKMIPYSVKQAGKKLMEDGEIIQFREKDASDHFLTYFIDQNVVEDAGNENYA
CSCADFQLNAICKHIYATHLKMEKEKQKAAKQDFKNRILTQESNTLLSLFQQNMAQQLEV
EEDNTNKTPLQTQYIIRLKPDDSSYIMTIEVKVGTERTYVVKNMNTFLAAIRDRQWLVFT
KNFAYDPNEHFFLEEDKQILDKLLQISEIAKMYDTDSFYWSKSYAEEKNLTIPPSMASDL
LELLTERDTTCIIMKERVEDIKYRGINVRHDNLDFIFELKKSAEDKYQLEMEDLQQAIFF
EAYQLLFFDGTFFIPAKEVWESLKPLMEFHKVTKNEVVQFSESQLSEVISYVLPALQKSG
KLKLDDSIEDRITQQPLDCKLFIALEYGEHTLRLEYHYGNQLFDPFATSEEENEKIMIRD
VEKEARVMNIIESAPVHFSGTKMVVNKQEKDLYQFYYRTIPKLAEYAEIYMEDGLEEMVE
ENVRPVTTLDVSGDNDYLSVSFDFKGIPEEEVQNVLESLREKRSYHRLKSGRFLSLESEN
YKQMEDVLQMLEVRKKDVQANMQVPLYRGMQIYDILGAGAQDEHHKFSRSFRELLTDITT
QSEDSFALPKGLKAELRDYQLTGFEWMKSLAKYNLGGILADDMGLGKTVQTISFLASELE
DNPNLKPVLIITPASLLYNWQSELEKFAPTIPVTVLHGTKQSRIAEMEEMKHGHVYLISY
PSLRQDIVHFADVAFSSVIIDESQAIKNYHTKASQAVRALKRNHVFALSGTPLENSIDEL
WAIFQTLMPGFFPSLRKFKEIPYDNIAKMIRPFLLRRLKQDVVKELPDKIETNLYSELTD
EQKTIYLAYLEKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGESGKLL
QLFDTIQTARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFN
EGENDIFLISLKAGGTGLNLVGADTVILYDLWWNPAVEEQATGRAHRIGQKRVVQVFRMI
TKGTIEERIFDLQKKKQALVDELIQPGEQMLGKLSTEEIKQILQLDNGRDDK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggagcactttacagcaattcaaaataaaatgatcccatatagtgtgaagcaggctgga
aagaaactgatggaagacggagaaatcattcagtttcgtgaaaaagatgcatcagaccat
tttttaacgtattttattgatcaaaatgtcgtagaagatgcaggtaatgaaaattatgcg
tgtagttgtgccgattttcaattgaacgcgatttgcaaacacatctacgcaacccatctg
aaaatggaaaaagaaaagcaaaaagcagccaaacaagattttaaaaatcgaattctcacg
caagaatcaaatacacttctttccctttttcaacaaaatatggcgcaacagctcgaagta
gaagaggacaatacgaataaaacgccactccaaacgcagtatatcattcgtttaaaaccc
gatgattctagttatatcatgactattgaagtcaaagttggcacagaacggacctatgtt
gtaaaaaatatgaatacatttttagccgcaattcgcgacaggcagtggcttgttttcact
aagaattttgcttacgatccaaacgagcatttctttcttgaggaagacaaacaaattttg
gataaactactgcaaatcagtgaaattgccaaaatgtatgatacagattctttttattgg
tccaaatcttacgcagaagagaaaaacctaacgattccaccgagtatggcgagcgacttg
ttagaactactcacagaacgcgatacgacgtgcattattatgaaagaacgcgtagaagat
attaaatatcgcggtatcaatgtgcgccacgacaaccttgatttcatttttgaactcaaa
aaaagtgcagaagataaataccaactagaaatggaagacttacaacaagcaatctttttt
gaagcctaccaacttcttttctttgacggtacctttttcataccggcaaaagaagtatgg
gaatcgttgaaaccattgatggaatttcataaagtaacgaaaaatgaagtggtgcaattt
tcagagtcgcaattaagtgaagtcatttcctacgtattaccagccttacagaaaagcggg
aagttaaagctggatgactcgattgaagaccggattacgcaacagccacttgattgtaaa
ttattcattgcactcgaatacggggagcatacgttgcgacttgaatatcattatggcaat
cagcttttcgatccatttgcaacatcagaagaagaaaacgaaaaaatcatgatacgtgat
gtcgaaaaagaagcccgtgtaatgaatattatcgaaagcgcccctgttcatttttctgga
acaaaaatggtcgtcaataaacaagaaaaggatttgtatcaattttattatcgcaccatt
ccaaaactagcagagtacgcagagatttatatggaagacggtctcgaagaaatggtagaa
gagaatgtgcgcccagttacgacactggatgtttctggtgataacgattatctttctgtt
tcgtttgatttcaaaggtattccggaagaagaagtgcaaaatgtcctagaatctttgcgt
gaaaaacgtagctatcatcgtctgaaaagtggtcgtttcttatcgcttgaatcagaaaac
tacaaacaaatggaagatgtactccaaatgttagaagtgcgtaagaaagatgtccaagca
aacatgcaagtaccgctttatcgtgggatgcaaatttatgatattttaggagcaggagca
caagatgaacatcataaattcagtcgttctttccgcgaattgcttacagatattacgacg
caatccgaagacagctttgcgttaccaaaaggattaaaagcagagttacgtgattatcaa
ctaactgggtttgaatggatgaaatcccttgcgaaatataatttaggcggcattttagca
gatgatatggggcttgggaaaacagtgcaaacgattagttttctagcatctgagttagaa
gataaccctaacttaaaaccagtcttaattattacgccagcatcactactttataactgg
caaagcgaattagaaaaatttgcgccaactattccagtgaccgttttacatggaacgaaa
caatcccggatagccgaaatggaagaaatgaagcatggccatgtctacttgatttcgtat
ccatcgttacgccaagatattgtccattttgcagatgtcgctttttcaagtgttattatt
gacgaatcacaagctatcaagaattatcatacgaaggcctctcaagctgtgcgcgctttg
aaacgcaatcatgtattcgcgctcagtggaacgccgcttgaaaacagcatcgatgaacta
tgggctattttccaaacattaatgccaggatttttcccttcattgcgcaaatttaaagaa
ataccttacgacaacattgctaaaatgattcgtccattcttactacgtcgactaaaacaa
gatgtcgtcaaagaactaccagataaaattgaaaccaacctttattctgaattaaccgat
gagcaaaaaacaatatacttagcttatttagaaaaaattcaagctgatttagaagcaagc
aatggtaatgcttccgaagaacgaatcaaattactcgcaggattaacccgtttacgccaa
atttgctgtgatccgagcctttttgtggaaaattatcaaggtgaatctggtaaattacta
cagttatttgatacaatacaaacagcaagagaaaacggtaaacgcattctcctattttcc
caattcacgggtatgcttggaattattcgccaaaaactagaagaagatggacaaacactt
ttctacatggatggtaaaactccatcgaaaacaagactagatatggttaatgcttttaac
gaaggggagaatgatattttcttgatttccttaaaagctggtggaaccgggctcaatctt
gttggcgcggataccgtgattttatacgatttatggtggaatccggctgtagaagaacaa
gctaccggacgtgcacatcgaatcgggcaaaaacgcgttgtccaagtgttccggatgatc
actaaaggaacgatagaagaacgaatttttgatttacaaaagaaaaaacaagcgctagta
gacgaactaattcaaccgggcgaacaaatgctaggaaaattaagcacagaagaaataaaa
caaatcttacaattggataatggaagggatgacaaataa
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