Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01703
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Entry
Lm4b_01703 CDS
T00898
Name
(GenBank) Putative A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Pathway
lmc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lm4b_01703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmc03400
]
Lm4b_01703
Enzymes [BR:
lmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Lm4b_01703
DNA repair and recombination proteins [BR:
lmc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Lm4b_01703
Prokaryotic type
Lm4b_01703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
CAS05463
LinkDB
All DBs
Position
complement(1740253..1741350)
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AA seq
365 aa
AA seq
DB search
MRKMKRLTWDETKITAFQEALVSWYEANKRVLPWRENTDPYRIWVSEIMLQQTKVDTVIP
YFNRFMTQFPTMEDFVQADEADILKAWEGLGYYSRVRNLQTAMKQVMADFSGEVPTDLTT
ILSLKGVGPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKVSTRKIFEEVLYQ
LIDKENPAAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHKNGVETNYPVKIKKVKTKT
KELLSIIVISEDGKIAIEKRPENGLLANMWQFPTIEISKKENEEVAKLQFLHNYGLDVLL
EDEPIAHIKHVFSHLVWKMDIRVAKLQSAIPNENWYFATEEEMKRLAFPVPYQKMWQAWK
DFKGE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatgaagagactaacttgggatgaaacaaagataactgcttttcaagaagca
ctcgtttcctggtatgaagcgaataagcgcgtcttaccgtggcgcgaaaataccgatcct
tacagaatttgggtctcagaaatcatgcttcaacaaacaaaagtcgacacagtaattcct
tattttaatcgctttatgactcaatttccgacgatggaagattttgtccaagcggatgaa
gcggatattttaaaagcgtgggaaggcttaggctattattctcgtgtcagaaacctccaa
acagccatgaagcaagtgatggccgatttttctggagaagttcctaccgacttaaccact
attttatcgcttaaaggtgtgggaccgtatacagccggagctatcttgagtattgcctac
aaccaagctgaaccagcagtggatggcaatgttatgcgtgtcatcgcccgcgttttagaa
attagtgaagacatcatgaaagtgtccacccggaaaatttttgaagaagtgttatatcaa
ctaattgacaaagaaaatccagccgctttcaaccaaggtttaatggaaattggtgcgctt
gtttgtacaccaacaaaaccaatgtgtatgctttgtccgctccaaccgttttgcgaagcg
cataaaaatggcgttgaaacgaattatccagtaaaaataaaaaaagtgaaaacgaaaacc
aaagaactattaagcatcattgttatttcagaggacggaaaaattgccatagagaaacga
ccagaaaatggtttgcttgcaaatatgtggcaatttcctactattgaaatttcgaaaaaa
gaaaatgaggaagtagctaaactacaatttttacataattatggcttagacgttttacta
gaagacgaaccaattgcgcatatcaaacacgttttttctcatttagtatggaaaatggac
attcgtgtggcaaaacttcagtcagcaattccaaatgaaaattggtattttgcaacagaa
gaagaaatgaagcgacttgcttttccagtaccatatcaaaaaatgtggcaagcgtggaaa
gattttaagggggaataa
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