Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01765
Help
Entry
Lm4b_01765 CDS
T00898
Name
(GenBank) Putative hypothetical RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmc03009
]
Lm4b_01765
Enzymes [BR:
lmc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Lm4b_01765
Ribosome biogenesis [BR:
lmc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Lm4b_01765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
PrmA
TRM5-TYW2_MTfase
MTS
RrnaAD
Methyltransf_15
Methyltransf_32
Methyltransf_11
TPMT
DOT1
DUF2023
Motif
Other DBs
NCBI-ProteinID:
CAS05525
LinkDB
All DBs
Position
complement(1806563..1807924)
Genome browser
AA seq
453 aa
AA seq
DB search
MEASLLKKNQSIELTIEDLTHDGSGVGKIDGYPLFIPNTLPGEKVTAKIIKLNKNYGFAR
MENIETVSADRVEPPCAVYSKCGGCSLQHLSYDGQLEFKRNQVEETMKRIGKLNVEVPET
LGMENPWRYRNKSQVPVGFVNGKLTAGFYQKRSHAIIDMSTCLIHNEQGDFAVQKTREIL
AKYGTEPYDEQTGKGDIRHIMTRFAHTTGQLMIVLVTTKERMPFKEEIVRELVEQLELTS
IVQNINPHKTNVIFGDRTKTLWGKDIIEDTIHGIRFAISARSFYQVNPIQTEVLYQQAID
AAELTGEETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELANTTFET
GKAEEVIPAWYKAGIVADVLVVDPPRKGCDEKLLETILAMKPKKVVYVSCNPGTLARDMK
ILTDGGYVAKKVQPVDMFPMTTHIEAVTVLHLN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcatcccttttaaaaaagaaccaatccattgaacttactattgaagatttaacg
catgacggcagtggggttggcaaaattgacggatacccacttttcattccaaatacgtta
cctggcgaaaaagtgacagccaaaataataaaattaaataaaaattatggctttgctcgg
atggagaatattgaaactgttagtgctgatcgtgtagagcctccttgtgcggtttattcc
aaatgtggcggttgtagcttgcaacacttaagctacgatggccagcttgaattcaaacga
aatcaagtggaagaaacgatgaaacgtattggcaaactaaacgtagaagttcctgaaaca
ctaggcatggaaaacccgtggcgctaccggaataaatcacaagtaccagtaggatttgtt
aatggtaagttaacagcaggtttttaccaaaaaagaagccatgccattatcgacatgtcc
acttgtttaattcataatgagcaaggtgattttgctgttcaaaaaacacgtgaaatccta
gctaaatacggaacagagccttatgatgaacaaacaggaaaaggcgatatccgccatatt
atgacaagatttgcgcatacaactggacagttaatgattgtccttgtaacaacaaaagaa
cgtatgccatttaaagaagaaatcgtacgggaattggtcgaacaattggaattaacctcg
attgttcaaaatattaatccacataaaacaaatgtgatttttggagatcgtacgaaaaca
ctttggggaaaagatatcattgaggatacgattcatggcattcgatttgcaatttcggct
cgttcattttatcaagtaaacccaatccaaacagaagttttgtatcaacaagcaatcgat
gcggctgagttaacaggagaagaaacagtgattgacgcctattgcggcattggttctatt
tctctttgtctcgcgaaaaaagccaagcatgtctacggggtagaaattgtggatcaagcg
atacaagatgctcgtgcaaatgcagaactcaatgaattagcgaatactacttttgagaca
gggaaagcagaagaggttattccggcgtggtacaaagctggaattgtagcagacgtctta
gttgtcgatccaccacgaaaaggttgcgatgaaaaattactggaaacaattttagcaatg
aaaccgaagaaagtagtgtatgtttcttgtaatccagggacattagcccgtgatatgaaa
atcttaacggatggcggctatgtagcgaaaaaagttcagcctgtagatatgtttccaatg
acaacacatatagaagctgtgactgttctacatttaaattaa
DBGET
integrated database retrieval system
