Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01821
Help
Entry
Lm4b_01821 CDS
T00898
Symbol
rncS
Name
(GenBank) Putative ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmc03019
]
Lm4b_01821 (rncS)
03009 Ribosome biogenesis [BR:
lmc03009
]
Lm4b_01821 (rncS)
03036 Chromosome and associated proteins [BR:
lmc03036
]
Lm4b_01821 (rncS)
Enzymes [BR:
lmc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Lm4b_01821 (rncS)
Messenger RNA biogenesis [BR:
lmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Lm4b_01821 (rncS)
Ribosome biogenesis [BR:
lmc03009
]
Eukaryotic type
90S particles
RNase
Lm4b_01821 (rncS)
Prokaryotic type
rRNA processing factors
Lm4b_01821 (rncS)
Chromosome and associated proteins [BR:
lmc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Lm4b_01821 (rncS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CAS05579
UniProt:
C1KWA4
LinkDB
All DBs
Position
complement(1866411..1867100)
Genome browser
AA seq
229 aa
AA seq
DB search
MNQWEELQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSNY
LFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLGKGEEKAGGRTRPALLADV
FESFIGALYLDNGIDKVVTFLERVIFPKIDAGAYLQTVDYKTQLQEIVQRDRDVLIEYDI
LGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSAAQFAINQLTHR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatgggaagagttacaagaaagcgttggattcgattttaaagatgttgaatta
ttaaaacaagcattcacacattcctcatatgtgaacgaacaccgccgggaaaatgtgaaa
gataatgaacgcttagaatttcttggtgatgcagtccttgaactcactgtatcgaattat
ctatttaacaaatatccagatatggcagaaggacacatgacaaaaatgcgcgcagcaatt
gtttgtgagccttctttagtcgagtttgcagaagcagtacatttttctaaatacgtacga
cttggtaaaggggaagaaaaagccggtggaagaactcgtccggcacttctggcggatgta
tttgaatcttttatcggcgcgctttatttagataatgggattgacaaagttgtgacattt
ttagaacgtgttatttttccaaaaattgatgcaggggcatatctacaaacagtggattat
aaaacgcaactgcaagaaattgttcaacgggaccgtgatgtcttgatcgaatatgatatc
cttggcgaaacaggaccagcgcacaataaagcattcgatgcccaagtaattgttaacgga
caagtactcggaaaaggcagcggcagaacaaaaaaacaagcagaacaaagtgcggcacaa
tttgctataaaccaactaacacacagataa
DBGET
integrated database retrieval system
