Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01838
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Entry
Lm4b_01838 CDS
T00898
Name
(GenBank) Putative RNA-binding Sun protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmc03009
]
Lm4b_01838
Enzymes [BR:
lmc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Lm4b_01838
Ribosome biogenesis [BR:
lmc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Lm4b_01838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
FtsJ
Methyltransf_25
Methyltr_RsmF_N
Methyltransf_4
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
CAS05596
LinkDB
All DBs
Position
complement(1882498..1883832)
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AA seq
444 aa
AA seq
DB search
MKKQKTVRAIALELIIKIENNQSYSHLLINDALKKQKLNPLDKGLLTELVYGTTQRKITL
DYYLAPFLNKEPDNWVKNLLRMSVYQLTFLDKVPEHAILNEAGDIAKDLGHQGVTKFVNG
VLRNVIRKGVPSIDAIKDPVQKIAVETSLPEWLAKRWTDQYGIEKLREIGLAFLVAPHQS
IRVNQTEIPTEQLIKELNDQGITVTRNEFIEEALLVEKGSVAETKAYKDGKCSIQDESSM
LAAYALQLEDNLTVLDACAAPGGKTTHIAEKMHGTGMVHALDIHEKKTKLIDQAAKRLQL
LNIRTAHLDARTASTMFEPETFDRILVDAPCSGFGVLRRKPDIKYAKTEKDIHKLAEIQL
AILDDVSQLVKENGILVYSTCTIDKEENETVLRAFLEKHPEFTLEPVVLPEKLAQIKKDD
FIQLLPTDIGSDGFFVSSLRKVKS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaaaaaacagttcgtgcgattgcattagaactcatcattaaaatcgaaaat
aatcaatcatacagccacttattaattaatgacgcattaaaaaaacaaaagttaaatccg
cttgataaagggcttttgactgaattagtatatggtacaacacaacgcaaaattacactt
gattactatttagcaccgtttctcaataaagaacccgacaattgggtgaaaaacttacta
agaatgtccgtttatcaattaacctttttagataaagttcctgagcatgcgattttaaat
gaagctggtgacatcgcgaaagatttaggacaccaaggtgtaactaagttcgtcaacggc
gtattgcgtaatgttattcgaaaaggcgtaccaagtattgatgccatcaaagaccctgtg
caaaaaatcgctgttgaaacaagtctgccagaatggttagcaaaaaggtggacagatcaa
tatggtatcgaaaaactgcgtgaaatcggtttagcattccttgtcgcgccacaccaaagt
atccgcgtcaaccaaacagaaattcctactgaacaattaatcaaagaactaaatgaccaa
ggaatcaccgtgacacgtaatgaatttatcgaggaagcgttacttgttgaaaaaggatct
gtagcagaaacaaaagcatacaaagacggtaaatgtagcattcaagacgaaagctcaatg
ctcgcagcctatgcgcttcaactagaagacaatttgacggtattagatgcttgtgcggca
ccaggcgggaaaacaacccatatcgcggaaaaaatgcacggcacgggaatggttcatgca
ctcgatatccacgaaaagaaaaccaagctaattgatcaagccgccaaacgattgcaacta
cttaatattcgtacggcgcatttagacgcaagaaccgcaagtaccatgtttgaaccagaa
acatttgaccgtattttagtggatgctccgtgctccggctttggcgttcttcgcagaaaa
ccagacatcaaatatgcgaaaacagaaaaagatatccacaaattagcagaaattcaatta
gcgattttagatgatgttagccaattagtaaaagaaaatggtatattagtttatagtact
tgtaccattgacaaggaagaaaatgaaacggttcttcgcgctttcttagaaaaacatcca
gaattcacactagaacctgtagtactccctgaaaaattggcgcaaatcaagaaggacgat
tttattcaacttttaccaacagatattggaagcgatggtttcttcgtttctagccttaga
aaagtaaagtcctga
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