Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01951
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Entry
Lm4b_01951 CDS
T00898
Symbol
hup
Name
(GenBank) Putative non-specific DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmc03032
]
Lm4b_01951 (hup)
03036 Chromosome and associated proteins [BR:
lmc03036
]
Lm4b_01951 (hup)
03400 DNA repair and recombination proteins [BR:
lmc03400
]
Lm4b_01951 (hup)
DNA replication proteins [BR:
lmc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Lm4b_01951 (hup)
Chromosome and associated proteins [BR:
lmc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Lm4b_01951 (hup)
DNA repair and recombination proteins [BR:
lmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Lm4b_01951 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CAS05709
LinkDB
All DBs
Position
complement(1996183..1996458)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKTDLVNSVAELADLSKKDAAKAVEAVFETIQTSLSKGEKVQLIGFGNFEVRERAARK
GRNPRTKEEIDIPASKVPAFKPGKALKEAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaactgatttagtaaatagcgttgctgaactagctgatctttctaaaaaa
gacgcagcgaaagcagtagaagctgtattcgaaactattcaaacttctttatctaaaggt
gaaaaagttcaattaatcggatttggtaactttgaagtacgtgaacgtgctgcccgtaaa
ggtcgtaaccctcgtactaaagaagaaatcgacatccctgcaagtaaagtaccagctttc
aaacctggtaaagcgcttaaagaagctgttaaataa
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