Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_02008
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Entry
Lm4b_02008 CDS
T00898
Name
(GenBank) Putative transcription repressor of dra/nupC/pdp operon DeoR
KO
K05346
deoxyribonucleoside regulator
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmc03000
]
Lm4b_02008
Transcription factors [BR:
lmc03000
]
Prokaryotic type
Other transcription factors
Others
Lm4b_02008
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Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
HTH_23
HTH_Crp_2
Sigma70_r4_2
Sigma70_r4
HTH_24
HTH_IclR
MarR
HTH_38
TrmB
HTH_36
LacI
HTH_10
Fe_dep_repress
GntR
HTH_37
HVO_A0261_N
HTH_11
Crp
HTH_3
HTH_31
HTH_28
DUF134
UPF0122
Xre-like-HTH
HTH_ParB
HTH_6
wHTH-PRTase_assc
DUF7343
HTH_17
Sigma70_ECF
HTH_29
HTH_AsnC-type
DeoRC
S-AdoMet_synt_M
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
CAS05765
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All DBs
Position
complement(2058451..2059398)
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AA seq
315 aa
AA seq
DB search
MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSN
LTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYLEEIIHDGDILGVSWGTTM
YKIAQKLAPLKAEIKVVQLKGGVSHSDVNTYAAETLALFGAAYDTAPVSLPLPVVLDNPL
AKQMVEADRHIKNIIELGKKANIAIFTVGTVRDEALLFRLGYFSDQEKARLKEKAVGDIC
SRFFTIGGEIADEKMDERTIGIDLQDLKQKETAILVAGGERKIKAIHGALRGGYANHFIT
DQFTAKQLLEQNFIN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggataaacagaaagaacagctcagcgtagaggttgcgagactttattatcaggcggat
ctaggtcagcaagaaatcgccacacgcctaggtgtatccagaccgaccgtttccagatta
ctccaaaacgcgaaaacaaaaggatacgtcaaaatcgaagtccaagatccattttctaac
ctaacagaactggccgtggctttaaaagaaaaataccaacttaaaaatgtcaccgttgca
ttcagtcaaacaaatgattatagcgaaatcaccaagcaaatcagccaaagtgccgctgaa
tacttagaagaaattatccatgatggcgatattcttggcgtaagttggggaacaacgatg
tacaaaattgcccaaaaactagccccgctaaaagcagaaataaaagtcgtccaacttaaa
ggtggtgtgagtcattctgatgtcaatacgtatgcggccgaaacattagcgttattcggt
gcagcttatgacaccgcgccagtatcacttccacttcctgtagtccttgataatccactc
gctaaacaaatggtagaagcagaccgccatataaaaaatatcatcgaactcggtaaaaaa
gccaatatcgctatttttacagtaggaaccgtgcgtgatgaggccctgcttttccgccta
ggctatttttccgatcaagaaaaggctcgcttaaaagaaaaagcagtcggcgatatttgt
tcgcgatttttcacaattggcggcgaaatcgctgacgagaaaatggacgaacgaaccatt
ggtatcgacttgcaagatttaaagcaaaaagaaacagccattcttgtcgcaggtggtgaa
cgaaaaataaaagcgattcatggcgcacttcgaggcggttatgccaatcattttattacc
gaccaatttaccgcaaaacaactacttgaacaaaatttcatcaattag
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