Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_02198
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Entry
Lm4b_02198 CDS
T00898
Name
(GenBank) Putative sigma-54-dependent transcriptional activator
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS
MCM
AAA_2
HTH_30
AAA
PAS_9
AAA_16
HTH_50
AAA_7
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAS05956
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Position
complement(2256089..2257456)
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AA seq
455 aa
AA seq
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MFDLMDNLLGVQSFGELNKDMPTTLFVTDADGNILISNKFTALTVGMSLEELLRCNVRDL
VEDGVYNDSVTLEAIRTKQKKTKVINTKKGFSIRSTSTPILYPDGTVHLVVTMSDETQPD
SFKTWRGEAISGNKESLLLEDYKENDGTVIVAESVAMKQIVRVCNQIAPFDSKVLLYGES
GTGKEVLSRYIHEKSEQAAGPFISINCAAIPKALFESELFGHEKGSFTGADIEKPGMLEL
ADGGTLFLDEISEMPLELQAKMLRVLETGEVRRLGSTTETKRRFRLISATNRNLGEMVEK
GTFRRDLYYRINVVPVHIPALRERPQDIIGLARQFIQKFNQKYQKDFQLSGDKTKELLSH
NWPGNVRELRNQIERLVVMSGNKEVTVAEIDDFALDLHFKEQTKKDSLYLKDYLQDVEKH
FILRVLEESNGNVTKAASTLGIHRSVLYRKLKTLH
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacttaatggataacttgctgggagtacagtcatttggtgaattaaataaggac
atgccaacgacactttttgtcacggatgcagatggtaatattttaatttctaataaattc
actgcgctcacagttggaatgtcgctcgaagaattgcttcgttgtaatgtaagagaccta
gtggaagacggtgtatacaatgattctgtcacactagaagcaatccgcacaaaacaaaag
aaaacaaaagtgatcaatacgaagaaaggttttagcatccgctcgacttctacgccaata
ctttatcctgatggcacggtgcatttagttgttactatgtcagatgaaacgcaaccagat
agttttaaaacatggcgtggtgaggcaatttcggggaataaagagtcgcttcttcttgag
gattataaagaaaatgatggcactgtgatagtagcagagagcgtcgcgatgaagcagata
gttcgtgtgtgcaaccagatcgctccgtttgacagtaaagtcttattatacggggagtcc
ggtactggtaaagaagtcttgtcgcgctatattcatgaaaaaagtgaacaagctgctgga
ccttttatctcgattaactgtgcggcaatcccaaaagcattatttgaatctgagcttttt
ggacatgaaaaaggttcatttaccggtgcggatattgaaaaacccgggatgcttgaacta
gctgatggtggcacattatttttagatgaaatttctgaaatgccactagagctacaagcg
aaaatgctccgagtgcttgaaactggagaggtaagaaggcttggttcaacaaccgaaacg
aaacgccgctttagactgatttcagcgaccaatcgaaaccttggggaaatggttgaaaaa
ggaacatttaggcgtgatttatattatcgtattaatgttgtgccggttcacattccagca
ctcagagagcgaccgcaagatattattggtcttgcacgtcagttcatacaaaaattcaat
caaaaataccaaaaagattttcagttaagtggcgataaaacgaaagaattactttctcat
aattggccaggaaatgttcgtgaacttagaaaccagattgagcgattagttgttatgtct
ggaaataaagaagtgactgttgcagaaatagatgatttcgcactagacttacattttaaa
gaacaaacaaaaaaagactcactttatttgaaagattatttgcaagacgtggaaaaacat
tttatattgcgagtgctcgaagaaagtaatggaaacgtgacaaaagctgctagtacactt
ggaattcatcgttctgttttatatcgaaaactaaaaacacttcattaa
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