Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_02553
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Entry
Lm4b_02553 CDS
T00898
Name
(GenBank) Putative formate dehydrogenase alpha chain
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Pathway
lmc00630
Glyoxylate and dicarboxylate metabolism
lmc00680
Methane metabolism
lmc01100
Metabolic pathways
lmc01120
Microbial metabolism in diverse environments
lmc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Lm4b_02553
09102 Energy metabolism
00680 Methane metabolism
Lm4b_02553
Enzymes [BR:
lmc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Lm4b_02553
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_6
Fer4_2
Fer4_8
Fer4_7
Fer4_21
Fer2
Fer4_17
Fer4_9
Fer4_10
LdpA_Fe-S-bd
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
CAS06308
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All DBs
Position
complement(2632379..2635366)
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AA seq
995 aa
AA seq
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MGAKVSVQINGVARDVVEGTRILDYLNAEGIQHPHICYSEQIGPIQSCDTCMCEVDGELV
RACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNNNGNCKVHNTTELLGV
EKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNETLSIDWERSQPRVIW
DDDRPANLSSCVSCGLCATVCPCNALMEKSMLGQAGFMTGLDEDMLEPMIDMVKKVEPNY
QTVFAVSEMEAAMRETRTKKTKTVCTFCGVGCTFEVWTKDRKILKVEPTGEGPVNKFATC
VKGKFGWDFVNSEKRITTPLIREGNEFVPASWEDAIHLVATKLREIQAKYGNDSIGFISS
SKTTNEENYLMQKLARQVFETNNIDNCSRYCQAPASDGLTRTVGIGADSGTVEDIETAGL
VIIVGASPADGHPVLASRIKRAQKTRGQKLIVSDLRKHEMAERSDLFMHPKQGTDFVWLT
AVAKYMIDQGWHDEAFMENRISNVADYLSFLEPFTLEYAEKETGLSVETLKKVAQMVYEA
DGTAVCWGMGVTQNIAGSHTSSAIANLLLVTGNFGRHGAGAYPLRGHNNVQGACDMGSLP
NVLPGIQPLGNDEVRARFEEAYGVSISPEPGLKNNEMLDAIEAGTLHSMYVIGEEMAWVD
SNSNHVQEILASLDFFVVQDVFLSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVL
EPLGDSKPDWWIIQEVAKACGRTDWNYDHPSEIMDEIASLAPFFAGVRYDRMQGFNSLVW
PVSADGKDMPLLYEERFNFPDGKAQFSTLPYIAPITFPEEYNLTLNNGRLLEQFHEGNLT
DKSKGLDYKLPEVFVEVSHELAKERDLESGSLVRLSSPYGRIKLRAVVTERMKGNEVYVP
MHSVSSETAVNLLTSSAGDVRTKTPAYKQTKVNLTVLEKTGKNPLPDHNPRNRKRFPQNG
AEVARKWSREDYQPISKVNCACGGNCGCGGKRRNH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaaagtatcggtgcaaattaatggcgtggcgcgggatgtggtggaaggaacg
cgaatactggactatttaaatgcagaaggaatacagcatccgcatatttgttatagtgag
caaattggaccaattcaatcttgtgatacgtgtatgtgcgaggtggatggggaacttgtg
cgggcgtgcagcacgaatctgacagacgggatggaaattaaaactaattctgaattagcg
aaagatgcgcaattagaagcgatggacaggattttggaaaatcatttactgtattgtacg
gtttgtgataacaataacggtaattgcaaagtacataatacgacggaactgcttggtgtg
gaaaaacaagaacgtccttaccgcgaaaagggctatttgaatgatttttcgcatccgttt
tatcgttatgatccggatcaatgtattctttgtgggcgctgtgtggaagcgtgtcagcaa
gtacaagtgaatgaaacactttcgattgattgggaacgtagtcagccaagggttatttgg
gatgatgatcgtccagcgaatttatcgtcctgtgtttcttgtgggctgtgtgcgacggtg
tgtccttgtaacgcgttgatggaaaaatcaatgcttggccaagctggatttatgactggc
ttagacgaagatatgctagaaccgatgattgatatggtgaaaaaagtcgagccgaattat
caaaccgtctttgctgtgtcggaaatggaagcagcgatgcgggaaacgcggacgaagaaa
acgaagacagtttgtactttctgcggggttggttgtacgtttgaggtgtggacgaaggat
cgcaaaattttgaaagtcgagccaaccggagaaggtcctgtgaacaaatttgctacgtgt
gtgaaagggaaatttggttgggattttgtcaatagtgagaaacggattacgacgccgctc
attcgcgagggtaatgaatttgtgccggcgagctgggaagatgcaattcatctagttgcg
accaaactgcgagaaattcaggctaaatatggaaatgattctattggatttattagttct
tctaaaacaaccaatgaagagaactatttgatgcaaaaattggcgcggcaggtttttgaa
acgaataatattgataattgttcacgttattgtcaggcgcctgcttcggatgggctgact
cggacagttgggattggcgcggattcggggacagtggaagatattgaaacggccggactt
gtcattattgttggcgcatcaccagccgatggtcatccagtccttgctagcagaatcaag
cgagctcagaagacacgcggtcaaaagctgattgtttctgatttacgaaaacacgaaatg
gcagagcgttctgatttattcatgcatccaaaacaaggaaccgattttgtttggttaaca
gcggttgcgaaatatatgattgatcaaggatggcacgatgaagcctttatggaaaatagg
attagcaatgtagcagattatctatcatttttagaaccatttacattggaatatgcggaa
aaagaaacaggactatcagtagaaacattgaaaaaagtggcgcagatggtttatgaagca
gacgggacagcggtttgttggggaatgggagttacgcaaaatattgctggatcacataca
tcgtctgctatcgctaacctacttcttgtaactgggaacttcggaagacacggtgcgggc
gcttatccgcttagagggcataataatgtgcaaggtgcttgcgatatggggtcactacct
aacgttcttcctggaattcaaccgcttggaaatgatgaggttcgtgctcgttttgaagaa
gcttatggggtatcaatttcaccagaaccagggctgaaaaacaatgaaatgcttgatgct
attgaggcgggaacacttcattctatgtatgttattggtgaggaaatggcctgggtggac
tctaactcaaatcatgtgcaagaaatccttgcgagccttgatttctttgttgttcaagat
gtgttcttatcaaaaacagcacaatttgcagatgttgttttcccagcagctccttctctt
gaaaaagaaggaacatttaccaatacagagcgccgtgttcaacgactttatgaggtgtta
gagccgcttggagattcgaagccagactggtggattattcaagaagttgcgaaagcgtgt
ggcagaacggactggaattatgatcatccgagcgagattatggacgaaattgctagttta
gcaccattttttgcaggggttcgttatgaccggatgcaaggatttaacagccttgtatgg
ccagtgagcgcggatgggaaggatatgccgttactttatgaagaacgatttaattttccg
gacggcaaagcgcaattttcgacgttaccgtatattgcaccgattactttcccagaagaa
tataatttaacgctgaataatgggcgtttattggagcagttccatgaggggaatttgaca
gataagtcgaaagggttggattataaattaccggaagtgtttgtagaggtatcacatgaa
ttagccaaagaacgcgatttagaaagtggttcgctcgttcgtctaagttcgccttatggc
cgcatcaagcttcgtgccgttgtgactgagcggatgaaagggaatgaggtctatgtgcca
atgcattctgtgagtagcgaaaccgcggtcaacttactgacttcaagcgcgggagatgtt
cggacgaaaacaccggcatataaacaaacaaaagtgaacctcactgtacttgaaaaaaca
gggaaaaacccacttccagaccacaatccacgtaatcgtaaaagattcccgcaaaatggg
gctgaggtagcgcgcaaatggtcgagagaagattatcaaccgatttctaaagtgaactgc
gcttgtggtggtaactgcgggtgtggtgggaaaaggaggaatcactga
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