Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_02565
Help
Entry
Lm4b_02565 CDS
T00898
Symbol
truA
Name
(GenBank) Putative pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmc03016
]
Lm4b_02565 (truA)
Enzymes [BR:
lmc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Lm4b_02565 (truA)
Transfer RNA biogenesis [BR:
lmc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Lm4b_02565 (truA)
Prokaryotic type
Lm4b_02565 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
CAS06320
UniProt:
C1KZ13
LinkDB
All DBs
Position
complement(2651802..2652548)
Genome browser
AA seq
248 aa
AA seq
DB search
MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTVRITASGRTDTGVHAKG
QVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHARFGTVGKEYRYVVKRTKI
FDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSARTERDSKVRTLYSIDFYEED
DETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDISEALLARDRQKLISKTAPPQGL
YLWRVDYE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacgagatataaagcgataatttcttatgatggtagcgggttttatggctatcaggtg
cagccgaatacacggacggtccaagcggaaattgaaaaagcactgacaaaaatgcataaa
ggcaagactgtgcggattacagcatcaggaagaacagatactggtgttcatgcgaaaggt
caggttattcatttcgattcggaacttgatatcactgccgaaaaatttcaaaaagctttg
caagtcatgactccgttcgatattagctttttaacagtggaagaagtaccagacgatttc
cacgctagatttggcacagttggaaaagaatatcgttatgtggtaaagcggacgaaaatt
tttgatccttttagtcggaattttgcgctacattatccatatgaactggacatttcaaaa
atgaaattggcaagtaaacgcctgattggcgagcatgattttacaagtttctgttcggcg
agaacggagcgcgattctaaagtccgaacactttatagtattgatttttatgaagaggac
gacgagacgttagtgattgcttttcaagggaatggctttttatataatatggtgcgaatt
ttgacgggaactttgctcgatgcagggcaaggtcgaatctctccggatgatattagtgag
gctttattagcacgtgaccggcaaaaattaattagtaaaactgcgccgccacaagggtta
tatttatggcgagtggactatgaataa
DBGET
integrated database retrieval system
