Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_02729
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Entry
Lm4b_02729 CDS
T00898
Name
(GenBank) Putative D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Pathway
lmc00550
Peptidoglycan biosynthesis
lmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Lm4b_02729
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmc01002
]
Lm4b_02729
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lmc01011
]
Lm4b_02729
Enzymes [BR:
lmc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Lm4b_02729
Peptidases and inhibitors [BR:
lmc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Lm4b_02729
Peptidoglycan biosynthesis and degradation proteins [BR:
lmc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Lm4b_02729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
CAS06483
LinkDB
All DBs
Position
complement(2803071..2804408)
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AA seq
445 aa
AA seq
DB search
MKNIIKKTGIVIMAASLAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADK
LMGIASMTKMMDEYLLLEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQ
ELYEAMAIYSANGAAIAISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKG
GQQVGGPKDENKMTARGMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLL
PGLIYGRKGVDGLKTGTTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETN
KMLDYAFNNFKVKEVQKAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVPKNGNEPKLN
TKVTMKEKTIEAPVKKGTEVGKMEVSLKDGDKLGYVDGKQTETIDVLTASDVEKANWFML
SAQAVGSFFTGIGNYVSDGVKGWFN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacataattaaaaaaacagggattgtaatcatggcagcatcccttgcagtaagt
ggcttcttagtaagcccgaaagcagcacaagccgcagaagcaccaaatgtaaatgcaaac
gcagcaatcgcaattgaagaaagtactggtaaaattttatattcaaaagacgctgacaag
ctaatgggcatcgcatccatgacaaaaatgatggacgaatacttactactggaagcaatt
gacaaaggacaaattaaatgggacgacaaagtaaccatttctgaatatgcttacaaagtt
tcacaagacacatcactatcgaacgtaccacttagacttggcgaagaatacactgtacaa
gaattatatgaagcaatggcgatttactctgcaaacggagcagcaattgctatttccgaa
aaaattgcaggttctgaaaaagaatttgtcgatgctatgaataaaaaagcggacgaactt
aatctaggcgagcaccaattcgttaacgctacgggccttaataacgaagacttaaaaggc
ggtcagcaagtaggtggaccgaaagacgaaaacaaaatgacagctcgcggcatggcgaag
ttagcaaaacacttaataaatgattacccagatgtacttaaaaccgctagtacaactaag
aaagagttccgaaaaggtacatcagaccaaattgatatgacaaactggaactggttatta
ccgggcttgatttacgggcgcaaaggtgtagacggtttgaaaacaggaacaactgattat
gctggaatgtgcttgactgcaaccgctgtacaagatggaatgcgagttatcacagtcgta
ctccatgcaaatggtggagcgcctggcgagcatacaagtgctcgttttgatgaaacaaac
aaaatgctcgattatgcttttaataatttcaaagtaaaagaagtgcaaaaagcaggatca
aaagtaaaaaatccttctacaattgcagtagataaaggaaaagaagatacagtcggacta
gttacaaaagatgcagtgaagctagttgtaccgaagaatggcaatgaacctaagttaaat
acaaaggtaacaatgaaagaaaaaacaatagaagcaccagttaaaaaaggtacggaagtt
ggtaaaatggaagtatctctaaaagatggcgacaagttaggctatgttgacggaaaacaa
acagaaacaattgacgtactaactgctagcgacgttgaaaaagcgaactggttcatgctc
tccgcacaagcggtaggttctttctttacaggcattggtaattacgtttctgatggtgta
aaagggtggtttaattaa
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