Entry |
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Name |
(GenBank) tRNA pseudouridine synthase B
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KO |
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Organism |
lmd Leisingera methylohalidivorans
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Brite |
KEGG Orthology (KO) [BR:lmd00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:lmd03016]
METH_00115
Enzymes [BR:lmd01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
METH_00115
Transfer RNA biogenesis [BR:lmd03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
METH_00115
Prokaryotic type
METH_00115
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
23689..24609
|
AA seq |
306 aa
MARKRKGRDISGWLVVDKPAGLTSTAVVNKVRWALDAKKAGHAGTLDPEATGVLAVALGE
ATKTVPYITDALKAYTFTVRLGAATNTDDAEGEVIATSDERPADAQIKEALQPFLGEIMQ
VPPKFSAVKIDGQRAYKLARDGEEVELAARPLWVEELILLDRPDEDHVVLEMTCGKGGYV
RSIARDLGAALGCYGHVKQLRRIWSGPFDAEDGISLELVDELAKSTDLDQYLRPLEEGLA
DLPELKCTPQGAVRLRNGNPGMVMAADVEYGDEAWASLDGQAVAVGIYKAGELHPSRVFV
QPERAA |
NT seq |
921 nt +upstreamnt +downstreamnt
atggcacgcaaacgcaaagggcgcgatatttccggctggctggtggtggacaagcccgcg
gggctgaccagcacagcggttgtgaacaaggtgcgctgggcgctggatgccaaaaaggca
ggccatgcgggaaccctggaccccgaggcaaccggcgttctggctgtggcacttggagaa
gcaaccaagaccgtgccttatatcaccgatgcgctgaaggcctataccttcactgtgcgg
ctgggtgcggcgaccaataccgacgacgccgagggcgaggtgattgcgaccagcgatgaa
cgtcccgctgacgcgcagatcaaagaagcgctgcaacccttcctgggcgagatcatgcag
gtgccgcccaagttttcagcggtgaagatcgacggccagcgtgcctataagctggcgcgt
gacggcgaggaggtagagcttgctgcccgtccgctgtgggtcgaagaactgatcctgctg
gaccgtcctgatgaggaccacgtggtgctggaaatgacctgcggcaagggcggctacgtg
cgctcgatcgcccgcgatctgggggcggcgctgggctgctatggccatgtgaagcaactg
cggcggatctggtccggcccgtttgatgccgaggatggtatctcgctggagctggtggac
gagctggcgaaatccactgacctggaccagtatctgcggccgctggaggaaggactcgcc
gacctgcccgagctgaaatgcacgccgcagggtgcggtgcgcttgcgcaatggcaatccg
ggcatggtgatggccgcggatgtggagtacggcgatgaagcctgggcttcgctggatgga
caggcagtggctgtggggatctacaaagccggtgaattgcacccgagccgggtttttgtg
cagccggaacgagccgcgtag |