Leisingera methylohalidivorans: METH_00775
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Entry
METH_00775 CDS
T02961
Name
(GenBank) ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmd03019
]
METH_00775
03009 Ribosome biogenesis [BR:
lmd03009
]
METH_00775
03036 Chromosome and associated proteins [BR:
lmd03036
]
METH_00775
Enzymes [BR:
lmd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
METH_00775
Messenger RNA biogenesis [BR:
lmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
METH_00775
Ribosome biogenesis [BR:
lmd03009
]
Eukaryotic type
90S particles
RNase
METH_00775
Prokaryotic type
rRNA processing factors
METH_00775
Chromosome and associated proteins [BR:
lmd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
METH_00775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AHC99425
UniProt:
V9VLI6
LinkDB
All DBs
Position
141221..141898
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AA seq
225 aa
AA seq
DB search
MKLSKELRAFEDRIGHQFARPELLQRAVTHASVSSPNRKDNQRLEFLGDRVLGLVMATAL
LEHDKTATEGQLAPRFNALVRKEACADVAAEIDLGAVLKLGRSEMMSGGRRKQALLGDAM
EAVIAAVYKDAGFEAAAEMILRLWGRRVHQVESDARDAKTSLQEWAQARGQNPPSYVELS
RSGPDHAPVFTIAARLQDGTQAQATAGSKRQAEQAAAKALLTRLG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgtccaaggaattgcgcgcgtttgaagaccggatcgggcatcagtttgcccgg
cctgaactgttgcagcgcgctgtgacacatgcgtctgtgtcgtcgcccaaccgcaaggac
aaccagcggctggagtttctgggtgaccgggttctggggctggtgatggcaaccgctttg
ctggagcatgacaagaccgccaccgaggggcagctggcgccgcgcttcaatgcgctggtg
cgcaaggaggcctgcgctgatgttgccgcggaaatcgacttgggtgcagttctgaaactg
ggccggtcggaaatgatgtctggcggccggcgcaagcaggcgctgctgggtgatgcgatg
gaagcggtgattgccgcggtctacaaggacgcaggctttgaggccgcggctgagatgatc
ctgcggctgtggggccgccgtgttcatcaggtagaaagcgacgcacgcgacgccaagact
tcgctgcaggaatgggcgcaggcgcgcggtcagaacccgccgtcctatgtcgaactgtcc
cgcagcggcccggatcacgcgccggtcttcaccatcgcagcgcggctgcaggacgggacc
caagcacaggctaccgctggttccaagcggcaggccgaacaggccgctgcaaaggcgctg
ctgacgcggctcggataa
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