Leisingera methylohalidivorans: METH_00860
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Entry
METH_00860 CDS
T02961
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmd03019
]
METH_00860
Messenger RNA biogenesis [BR:
lmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
METH_00860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
Rad17
AAA_16
SKI
AAA_18
IIGP
Motif
Other DBs
NCBI-ProteinID:
AHC99439
UniProt:
V9VQ32
LinkDB
All DBs
Position
157097..157975
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AA seq
292 aa
AA seq
DB search
MLEAEQKAVPAVLVTGPSGAGRTTAINVLEDLGFEAIDNLPLRLLPGLIDAAAAPRPMAL
GLDSRNRDFSPRALLDVIDMLSGRREVELTVLYLDSKPDVLLRRYSETRRRHPLAPAESP
GEGVRRELDLMAPIRDRADILLDTSDMNVHQLKAEIERWFAPEGRALALSVQSFSYKRGM
PHGIDMVFDCRFLANPYWRPELRRHNGTEAAVQDYVKSDSRFTPFFTRVLDLTRLLLPAY
REEGKSHFSIAFGCTGGQHRSVAMAETLAKALAEDGLQVSIRHRELQGQRKK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagcggaacaaaaggcggtcccggcagtgctggtcactggaccctccggggcg
ggccggaccacggcgatcaacgtgcttgaagaccttggttttgaagcgatcgacaacctg
ccgctccggctgctgcccggactgatcgatgctgctgcggcaccgcgaccgatggcgctg
gggctggacagccgcaaccgggatttctcgccacgggcgctgctggatgtgatcgacatg
ctgtcaggccgccgcgaggtggagctgaccgtgctgtacctcgattcgaagcccgatgtg
ctgctgcgccgctattcggagacccgccgccgccacccgctggcgcctgcggaatcgccg
ggcgagggcgtgcgccgcgagcttgacctgatggcgccgatccgggaccgggcggatatc
cttctggacacctcggacatgaatgtccaccagctgaaggcggagattgaacgctggttc
gcgcccgaaggccgggcgctcgcactttcggtgcaaagtttctcatacaaacgcggcatg
ccgcatggtatcgacatggtgttcgactgccgctttctggccaacccctattggcggcca
gaattgcgccggcacaacgggacggaggcggcggtacaggactatgttaagtcagacagc
cggttcaccccattttttacccgggtgctggacctcacccgcctgctgctgcctgcctac
cgggaggaaggcaaatcgcatttttcgatagccttcggctgcaccggcggacagcataga
tcggtggcgatggcggaaaccctggccaaggcccttgcagaagacggtctgcaagtgtca
attagacaccgcgagctgcaaggccagcgaaagaagtga
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