Leisingera methylohalidivorans: METH_01200
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Entry
METH_01200 CDS
T02961
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
METH_01200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmd03021
]
METH_01200
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_01200
Enzymes [BR:
lmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
METH_01200
Transcription machinery [BR:
lmd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
METH_01200
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
METH_01200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
AHC99502
UniProt:
V9VNB6
LinkDB
All DBs
Position
213816..214832
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPAQLEVKPGNDPARQATVVAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMEVEGPKRLSVNAKGPAVVTAGDIAE
TAGIEVLNRDHVICHLDDGADLFMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAYAARILQDQLSIFVNFDEPESAG
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaactgggcagagctgatcaagccggcacagctggaagtgaagccgggc
aatgatcccgcacgccaggcaactgttgttgcagaaccgctggaacgcggtttcggcctg
accctgggcaacgcgctgcgccgcgtgctgatgagctcgctgcagggtgctgccatcacc
agcgtgcagattgacaacgtgctgcacgagttttcgtctgttgccggtgtgcgtgaagac
gtcaccgacatcatcctgaacctcaagggcgtgtccctgcgcatggaagtcgaaggcccc
aagcggctgtcggtcaatgccaagggtccggctgtcgtcaccgccggcgacatcgccgaa
accgccggcatcgaggttctgaaccgcgatcacgtcatctgccacctggacgacggcgcc
gacctgttcatggaactgaccgtgaacaccggcaaaggctatgtctcggcagacaagaac
aagccggaagacgcaccgatcggcctgattccgatcgacgcgatctactcgccggtcaag
aaggtctcctatgacgttcagccgacccgtgagggccaggtgctggactatgacaagctg
accatgaaggtggaaaccgacggctccatcacccctgacgatgccgtggcctatgccgcg
cgcatcctgcaggaccagctgtcgatcttcgtcaacttcgacgagccggaatcggctggc
cgccaggacgaggacgacggtctcgagttcaacccgcttctgctgaagaaagtggacgag
ctggaactgtcggtgcggtctgcaaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaagcggagatgctgcgcacccccaacttcggccgcaagtcc
ttgaacgagatcaaggaagtgctgtctggcatgggcctgcatcttggcatggatgtcgag
gactggccgccggacaacatcgaagatctggcgaagaagttcgaagacagcttctaa
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