Leisingera methylohalidivorans: METH_05870
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Entry
METH_05870 CDS
T02961
Name
(GenBank) transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmd03000
]
METH_05870
Transcription factors [BR:
lmd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
METH_05870
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AHD00318
UniProt:
V9VQP0
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All DBs
Position
1143065..1143643
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AA seq
192 aa
AA seq
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MAQNGTKDRIAGAADQLFYERGFEATSFADIAASVGISRGNFYHHFKSKDEILDAVITRR
MASTRIMLAKWQAQGGSPEGRIICFIRILIVNQAKITLYGCPVGTLVTELGKLDHAAQGQ
ANAVFTLFRDWLGRQFEEMGCSNGADALAMHLLARSQGVATLAQAFRDPAFIISEVEQMQ
AWLHGLVPVEPN
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaatgggacaaaagacaggatagccggggcagctgatcagctgttttatgaa
cgtgggttcgaagccacatcctttgcggacattgctgcctccgtcggcatctcgcgcggg
aacttctaccaccatttcaagagcaaggacgagattcttgatgcggtgatcactcgccgt
atggccagcacccgtataatgctggccaagtggcaggcccaaggcggcagccccgaaggg
cggatcatctgcttcatccgcatcctgatcgtcaatcaggccaaaatcacgctgtacggc
tgccctgttggcacgctggtgacggaactgggcaagctggatcacgccgcacagggccag
gccaatgcggtcttcaccctgttccgcgactggcttggccgtcagttcgaggaaatgggc
tgctccaatggtgcggatgcgctggccatgcacctgctggcccggagccaaggggtggcc
acgctggcgcaggcgttccgcgatccggcatttatcataagtgaagttgaacagatgcag
gcctggctgcatggcctggtgcctgtggaaccaaattga
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