Leisingera methylohalidivorans: METH_06030
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Entry
METH_06030 CDS
T02961
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmd03000
]
METH_06030
03036 Chromosome and associated proteins [BR:
lmd03036
]
METH_06030
Transcription factors [BR:
lmd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
METH_06030
Chromosome and associated proteins [BR:
lmd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
METH_06030
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AHD00345
UniProt:
V9VSQ2
LinkDB
All DBs
Position
complement(1169477..1170364)
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AA seq
295 aa
AA seq
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MQMDPSQLAALSAVLRLGAFEAAAHALSVTPSAVSQRIKALEDRIGTALVLRGAPCTGTA
AGLRIAKHAEDIGLLEAQLARELSLEADHGPVRLRIAVNADSLASWFIEAMAGVEGVLFD
LLVDDQDHSAEWLKRGEVSAAVTASSKPVTGFDAYPLGTLNYVATASPDYLARWFPDGVT
PGAAARAPCLIFNAKDNLQRLWLERNAGPGLSPPAHYLPSTQAFIDAAAAGLGWGMNPLA
MVAGDIRSGRLVPLIPDTALPVPLTWQVARVMAPALAEVTRAVQKSAKMYLSQTA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggaccccagccagctggcagcgctgagcgcggtgctgcgcctcggcgccttt
gaggccgcggcgcatgcgctgtcggtgaccccctcggccgtatcgcagcggatcaaggcc
ctggaggaccgcattggcaccgcgctggtgctgcgcggcgcgccgtgcaccggcaccgca
gcgggcctcaggattgccaaacatgccgaggacatcggcctcttggaggcgcagctggcg
cgtgaattgtcattggaggcggaccacggcccggtgcggctgcggattgcagtcaatgcc
gacagtctggccagctggttcatcgaggcaatggctggtgtggagggggtgctgttcgat
ctgttggtggacgatcaggaccacagcgcggagtggctgaaacggggggaggtgtcggcg
gcggtgaccgccagctccaagcccgtgaccgggtttgatgcctatccgctgggcacgctg
aattacgtggcaaccgccagcccggattatttggcgcggtggttcccggacggggtgacc
cccggggcggccgcccgcgcgccctgcctgattttcaacgcaaaagacaatctgcagcgg
ctgtggctggaacggaatgcggggccggggctgtctccgccggcgcattacctgccctcg
acacaagccttcattgatgctgccgcagcgggcctgggctggggcatgaacccgctggcc
atggtcgccggcgacatccgcagcggacggctggtgccgctgatcccggacaccgcgctg
ccggtgcccctgacctggcaggttgcgcgggtcatggcccctgcccttgcggaggtgacc
cgcgcggtgcagaaatcagctaagatgtatttgtcgcaaaccgcatga
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