Leisingera methylohalidivorans: METH_06055
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Entry
METH_06055 CDS
T02961
Name
(GenBank) TetR family transcriptional regulator
KO
K02167
TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmd03000
]
METH_06055
Transcription factors [BR:
lmd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
METH_06055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
AbiEi_4
TetR_C_31
DUF1707
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
AHD00348
UniProt:
V9VQR7
LinkDB
All DBs
Position
complement(1174187..1174762)
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AA seq
191 aa
AA seq
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MSRKRIRDIRNEELIEATIVAVHKRGYGVVTMAEIAREAGASAASINYYFGSKEGLMEAT
MLHLLGKLRRAMSEGYATARTPRERLYAVMDANFADGLFTVPQCSIWMQFWANAPYSPRL
SRLHRINRARVRSHFLAELRALLPAGQLETARQALQCYMDGVWLQAAQSDAPLDPDEARA
AAHRVVDLVIP
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggaaacgcatccgggacatccgcaacgaagagctgatcgaagccaccatcgtt
gccgtgcacaagcgcggctacggggttgtaaccatggcggaaatcgcgcgtgaggcaggc
gcctcggcggcgtcgatcaactattatttcggctccaaggaaggcctgatggaagccacc
atgctgcaccttcttggcaagctccgccgcgcgatgagcgaaggttacgcaaccgcccga
accccgcgcgagcggctttatgcggtgatggatgcgaattttgccgacggcctgttcacc
gtgccgcagtgcagcatctggatgcagttctgggcaaatgccccctattcaccgcgcctc
agccgcctgcaccgaatcaaccgggcccgggtgcgcagccatttcctggccgaactgcgg
gcgctgctgcctgccgggcagctggagaccgcgcggcaggcgctgcaatgctacatggac
ggggtctggctgcaggcggcgcaatccgacgctccgctggacccggatgaagcccgcgcc
gcggcgcaccgggtggtggatctggtgatcccctga
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