Leisingera methylohalidivorans: METH_07480
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Entry
METH_07480 CDS
T02961
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd00061
Fatty acid biosynthesis
lmd00071
Fatty acid degradation
lmd01100
Metabolic pathways
lmd01212
Fatty acid metabolism
lmd02024
Quorum sensing
lmd04146
Peroxisome
Module
lmd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
METH_07480
00071 Fatty acid degradation
METH_07480
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
METH_07480
09145 Cellular community - prokaryotes
02024 Quorum sensing
METH_07480
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lmd01004
]
METH_07480
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmd04147
]
METH_07480
Enzymes [BR:
lmd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
METH_07480
Lipid biosynthesis proteins [BR:
lmd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
METH_07480
Exosome [BR:
lmd04147
]
Exosomal proteins
Exosomal proteins of breast milk
METH_07480
Exosomal proteins of breast cancer cells
METH_07480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AHD00566
UniProt:
V9VPD0
LinkDB
All DBs
Position
1434140..1435648
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AA seq
502 aa
AA seq
DB search
MNIAVWLQRMAAADAARPALFLGREQVADYSDFHARAASVAGWLQVQAVQPGDRVGIFMK
NCPDYLIALYGIWYAGAAAVPVNAKLHGKEAKFILENSGARLVFTSPGLTEAVNGAGADL
RCVDTAGAEYAEAMQAAPVSGPVFRAPEDLAWLFYTSGTTGRPKGVMITHRMLTTMAIAY
FADVDQVSAADQALYAAPMSHGAGLYAIQHVLAGAAHVCPASGGFDEAEILDLAAHFGRV
HMFAAPTMITRMTSEAKRLGRKGEGLRTVVYAGGPMYVTDIVEAVEHFGPKFVQVYGQGE
CPMAITALPRHDVQDRSHPRWRERLASVGRAQSVVEVRIGTPEGEFLPAGSHGEIMVRGD
VVMPGYWNNPEATATTLVDGWLMTGDMGVLDADGYLTLQDRSKDMIITGGSNVYPREVEE
VLLLHPGVREVSVVGRPHADWGEEVVAFVVGEAADAELDDLCNSRIARFKRPKAYICIGA
LPKNNYGKVLKTELRKRLAEDL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgcagtatggttgcagcgcatggcggcggcggacgcggcgcggcctgcattg
tttctggggcgggagcaggttgcggattattcagattttcacgcccgtgcggcgtcggtg
gccggctggctgcaggtgcaggctgtgcagccgggggaccgggttggcatcttcatgaaa
aattgcccggactacctgatcgcgctctatggcatttggtatgcgggtgcggcggcggtg
ccggtcaatgccaagctgcatggcaaggaagctaaattcattctggagaactccggtgcc
aggctggtattcacctcgcccggactgactgaggcggtgaatggggccggcgcggacctg
cgctgtgtggatactgccggagcggaatatgctgaagccatgcaggctgccccggtttcc
ggacctgttttccgcgcgcccgaagatctggcctggctgttctatacctccggcaccacc
gggcggccgaagggggtgatgatcacccaccggatgctgacaaccatggcaattgcctat
ttcgctgacgttgatcaggtgagcgcggcggatcaggcgctctatgccgcgccgatgagc
catggggcggggctttatgcaattcagcatgttctggcgggggctgcgcatgtctgcccg
gcttcgggcggatttgatgaggcggagattctggatctggcagcgcatttcggccgtgtt
cacatgtttgcagcgcccacgatgatcacaaggatgacctcggaagccaagcggctgggc
cgtaagggcgaggggctgcgcaccgtggtttacgcaggcgggccgatgtatgtgaccgac
atcgtggaggcggtggagcatttcggcccgaagttcgtgcaggtctacggccagggcgaa
tgcccgatggcaatcacggcgctgccgcgccacgatgtgcaggaccgaagccacccgcgc
tggcgtgagcggctggccagtgtcggcagggcgcaaagcgtggttgaggtgcggatcggc
acaccggagggggaattcctgcccgctggcagccacggcgagatcatggtgcgcggcgat
gttgtgatgcccggctattggaacaacccggaggccactgccacaacactggtcgatggc
tggctgatgaccggcgacatgggggttttggacgccgatggctacctcaccctgcaggac
cgctccaaggacatgatcatcaccggcggttccaacgtctatccgcgtgaggtcgaggaa
gtcttgctgctgcatcctggggtgcgcgaggtttcggtggtgggccggccccatgcggac
tggggcgaggaagttgtggcctttgtcgtaggggaggcagcggatgccgagctggatgac
ctttgcaacagccggatcgcccgtttcaaacgccccaaggcctatatctgcatcggggcg
ctgcccaagaacaattatggcaaggtattgaaaaccgagcttagaaaacgtctggcggag
gacctttga
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