KEGG   Leisingera methylohalidivorans: METH_08275
Entry
METH_08275        CDS       T02961                                 
Name
(GenBank) peptidoglycan-binding protein
  KO
K21470  L,D-transpeptidase YcbB
Organism
lmd  Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:lmd00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lmd01002]
    METH_08275
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lmd01011]
    METH_08275
Peptidases and inhibitors [BR:lmd01002]
 Cysteine peptidases
  Family C82
   METH_08275
Peptidoglycan biosynthesis and degradation proteins [BR:lmd01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   METH_08275
SSDB
Motif
Pfam: Scaffold YkuD PG_binding_1
Other DBs
NCBI-ProteinID: AHD00688
UniProt: V9VRN5
LinkDB
Position
1588585..1590213
AA seq 542 aa
MTRASAGNFMPGIKAGLFALALGGLTAGTVASSAQAEISAAFRQAVAEAASGSDSVAKFY
RENGYQAIWTGSDEASRQRRNALLAALNETSAHGLPDRSAEVSALMQQMRGVRTTRDIGS
IEAALSQALVDYATELQTGLLVPSRIDGGMVRKKHTVDGSGFLAGIRDQQPYAYMRSLVP
VSPQYRGLMREKLRLEQILAAGGWGPAVNAKKLEPGDQGPAVIALRNRLMAMGYLQRSAA
RSYDAALEKAVQDFQSDHGLETDGVAGAGTITEVNKPVSNRLKSIIVAMERERWLKPDRG
ERHILVNQTDFTAKIVDNGDVTFETRSVIGKNTHDRRSPEFSDEMEHMVINPSWYVPRSI
ITKEYLPKLQSNPNAVGHIQITDRRGRVVNRGSADFSQYNARNFPFSMRQPPSSRNALGL
VKFMFPNKYNIYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLAKQSENPKDFFHR
ILSSGKETKVALEQKVPVHIIYRTAVVTRKGRAEFRRDVYGRDAKVWAALERAGVVLPGV
QG
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgacgcgcgcatccgcaggaaactttatgccggggattaaagcagggctgtttgccctg
gcattgggcggcctgactgccgggactgttgcgagttcggcgcaggctgaaatctcggcg
gctttccgccaagctgtcgctgaagcagcctccggcagcgattctgtggccaaattctac
cgtgaaaacggatatcaggcgatttggactggctcggatgaggcatcgcgccagcgccgg
aacgctctgttggcagccttgaacgaaaccagcgcccacgggctgccggaccgctcggcc
gaagtcagtgcgctgatgcagcagatgcggggcgtccgcaccacacgggacatcggttcc
atcgaggccgcgctgagccaggcactggtggattatgcgacagagctgcaaaccggcctg
ctggtgccgtcgcggatcgacggtggcatggtgcgcaagaaacacacggttgacggttcc
ggctttttggcaggcatccgggatcaacagccttatgcctatatgcgtagcttggtgccg
gtgtcacctcaataccgtggcttgatgcgcgaaaaactgcggctggagcagattcttgcg
gccggcggctggggaccggcggtcaatgctaagaagctggaacccggcgatcagggcccg
gcagtcattgccctgcggaaccggctgatggcgatgggttatctgcagcggagtgctgca
cgcagctatgacgcggcgctggaaaaggctgtgcaagactttcaatccgatcatggcttg
gagactgatggcgtggcgggcgcaggcacgatcaccgaggtaaacaaacccgtctccaac
cgcttgaaatcgatcattgtcgcgatggagcgcgagcgctggcttaaacctgaccgcgga
gagcggcatattctggttaaccagactgatttcactgccaagatcgttgacaacggtgat
gtgaccttcgagacgcgatctgtgatcggcaagaacacgcatgaccgccgcagccccgag
ttctcggatgagatggagcatatggtgatcaatccgagctggtacgtgccgcgctcgatc
atcaccaaggagtatttgcccaagctgcagagcaaccccaatgcagtcggccatatccag
atcaccgaccggcgcggccgggtggtgaaccgcggctctgccgatttctcgcagtacaac
gcgcgcaacttcccgttttccatgcgccagccgccgagcagccgcaatgcgctggggctg
gtcaagttcatgttcccgaacaaatacaacatctatctgcacgacaccccgcagaagagt
ctgtttgcccgcgaagtgcgcgctttctcgcacggctgtatccgtctggcgcaaccgttt
gaatttgcttacgcgctgctggcgaagcagagcgaaaaccccaaggatttcttccaccgt
atcctgagcagtggcaaggaaaccaaggtagcgctggagcaaaaagtgccggttcatatt
atctaccggacggcggttgtgacgcgcaaaggccgcgctgagttccgccgcgatgtctat
ggccgcgacgccaaagtttgggcggcgctggagcgggcgggggtggtgctgcctggcgtt
caggggtaa

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