Leisingera methylohalidivorans: METH_08275
Help
Entry
METH_08275 CDS
T02961
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmd01002
]
METH_08275
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lmd01011
]
METH_08275
Peptidases and inhibitors [BR:
lmd01002
]
Cysteine peptidases
Family C82
METH_08275
Peptidoglycan biosynthesis and degradation proteins [BR:
lmd01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
METH_08275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AHD00688
UniProt:
V9VRN5
LinkDB
All DBs
Position
1588585..1590213
Genome browser
AA seq
542 aa
AA seq
DB search
MTRASAGNFMPGIKAGLFALALGGLTAGTVASSAQAEISAAFRQAVAEAASGSDSVAKFY
RENGYQAIWTGSDEASRQRRNALLAALNETSAHGLPDRSAEVSALMQQMRGVRTTRDIGS
IEAALSQALVDYATELQTGLLVPSRIDGGMVRKKHTVDGSGFLAGIRDQQPYAYMRSLVP
VSPQYRGLMREKLRLEQILAAGGWGPAVNAKKLEPGDQGPAVIALRNRLMAMGYLQRSAA
RSYDAALEKAVQDFQSDHGLETDGVAGAGTITEVNKPVSNRLKSIIVAMERERWLKPDRG
ERHILVNQTDFTAKIVDNGDVTFETRSVIGKNTHDRRSPEFSDEMEHMVINPSWYVPRSI
ITKEYLPKLQSNPNAVGHIQITDRRGRVVNRGSADFSQYNARNFPFSMRQPPSSRNALGL
VKFMFPNKYNIYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLAKQSENPKDFFHR
ILSSGKETKVALEQKVPVHIIYRTAVVTRKGRAEFRRDVYGRDAKVWAALERAGVVLPGV
QG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgcatccgcaggaaactttatgccggggattaaagcagggctgtttgccctg
gcattgggcggcctgactgccgggactgttgcgagttcggcgcaggctgaaatctcggcg
gctttccgccaagctgtcgctgaagcagcctccggcagcgattctgtggccaaattctac
cgtgaaaacggatatcaggcgatttggactggctcggatgaggcatcgcgccagcgccgg
aacgctctgttggcagccttgaacgaaaccagcgcccacgggctgccggaccgctcggcc
gaagtcagtgcgctgatgcagcagatgcggggcgtccgcaccacacgggacatcggttcc
atcgaggccgcgctgagccaggcactggtggattatgcgacagagctgcaaaccggcctg
ctggtgccgtcgcggatcgacggtggcatggtgcgcaagaaacacacggttgacggttcc
ggctttttggcaggcatccgggatcaacagccttatgcctatatgcgtagcttggtgccg
gtgtcacctcaataccgtggcttgatgcgcgaaaaactgcggctggagcagattcttgcg
gccggcggctggggaccggcggtcaatgctaagaagctggaacccggcgatcagggcccg
gcagtcattgccctgcggaaccggctgatggcgatgggttatctgcagcggagtgctgca
cgcagctatgacgcggcgctggaaaaggctgtgcaagactttcaatccgatcatggcttg
gagactgatggcgtggcgggcgcaggcacgatcaccgaggtaaacaaacccgtctccaac
cgcttgaaatcgatcattgtcgcgatggagcgcgagcgctggcttaaacctgaccgcgga
gagcggcatattctggttaaccagactgatttcactgccaagatcgttgacaacggtgat
gtgaccttcgagacgcgatctgtgatcggcaagaacacgcatgaccgccgcagccccgag
ttctcggatgagatggagcatatggtgatcaatccgagctggtacgtgccgcgctcgatc
atcaccaaggagtatttgcccaagctgcagagcaaccccaatgcagtcggccatatccag
atcaccgaccggcgcggccgggtggtgaaccgcggctctgccgatttctcgcagtacaac
gcgcgcaacttcccgttttccatgcgccagccgccgagcagccgcaatgcgctggggctg
gtcaagttcatgttcccgaacaaatacaacatctatctgcacgacaccccgcagaagagt
ctgtttgcccgcgaagtgcgcgctttctcgcacggctgtatccgtctggcgcaaccgttt
gaatttgcttacgcgctgctggcgaagcagagcgaaaaccccaaggatttcttccaccgt
atcctgagcagtggcaaggaaaccaaggtagcgctggagcaaaaagtgccggttcatatt
atctaccggacggcggttgtgacgcgcaaaggccgcgctgagttccgccgcgatgtctat
ggccgcgacgccaaagtttgggcggcgctggagcgggcgggggtggtgctgcctggcgtt
caggggtaa
DBGET
integrated database retrieval system
