Entry |
|
Name |
(GenBank) peptidoglycan-binding protein
|
KO |
K21470 | L,D-transpeptidase YcbB |
|
Organism |
lmd Leisingera methylohalidivorans
|
Brite |
KEGG Orthology (KO) [BR:lmd00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:lmd01002]
METH_08275
01011 Peptidoglycan biosynthesis and degradation proteins [BR:lmd01011]
METH_08275
Peptidases and inhibitors [BR:lmd01002]
Cysteine peptidases
Family C82
METH_08275
Peptidoglycan biosynthesis and degradation proteins [BR:lmd01011]
Peptidoglycan biosynthesis and degradation
Transpeptidase
METH_08275
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1588585..1590213
|
AA seq |
542 aa
MTRASAGNFMPGIKAGLFALALGGLTAGTVASSAQAEISAAFRQAVAEAASGSDSVAKFY
RENGYQAIWTGSDEASRQRRNALLAALNETSAHGLPDRSAEVSALMQQMRGVRTTRDIGS
IEAALSQALVDYATELQTGLLVPSRIDGGMVRKKHTVDGSGFLAGIRDQQPYAYMRSLVP
VSPQYRGLMREKLRLEQILAAGGWGPAVNAKKLEPGDQGPAVIALRNRLMAMGYLQRSAA
RSYDAALEKAVQDFQSDHGLETDGVAGAGTITEVNKPVSNRLKSIIVAMERERWLKPDRG
ERHILVNQTDFTAKIVDNGDVTFETRSVIGKNTHDRRSPEFSDEMEHMVINPSWYVPRSI
ITKEYLPKLQSNPNAVGHIQITDRRGRVVNRGSADFSQYNARNFPFSMRQPPSSRNALGL
VKFMFPNKYNIYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLAKQSENPKDFFHR
ILSSGKETKVALEQKVPVHIIYRTAVVTRKGRAEFRRDVYGRDAKVWAALERAGVVLPGV
QG |
NT seq |
1629 nt +upstreamnt +downstreamnt
atgacgcgcgcatccgcaggaaactttatgccggggattaaagcagggctgtttgccctg
gcattgggcggcctgactgccgggactgttgcgagttcggcgcaggctgaaatctcggcg
gctttccgccaagctgtcgctgaagcagcctccggcagcgattctgtggccaaattctac
cgtgaaaacggatatcaggcgatttggactggctcggatgaggcatcgcgccagcgccgg
aacgctctgttggcagccttgaacgaaaccagcgcccacgggctgccggaccgctcggcc
gaagtcagtgcgctgatgcagcagatgcggggcgtccgcaccacacgggacatcggttcc
atcgaggccgcgctgagccaggcactggtggattatgcgacagagctgcaaaccggcctg
ctggtgccgtcgcggatcgacggtggcatggtgcgcaagaaacacacggttgacggttcc
ggctttttggcaggcatccgggatcaacagccttatgcctatatgcgtagcttggtgccg
gtgtcacctcaataccgtggcttgatgcgcgaaaaactgcggctggagcagattcttgcg
gccggcggctggggaccggcggtcaatgctaagaagctggaacccggcgatcagggcccg
gcagtcattgccctgcggaaccggctgatggcgatgggttatctgcagcggagtgctgca
cgcagctatgacgcggcgctggaaaaggctgtgcaagactttcaatccgatcatggcttg
gagactgatggcgtggcgggcgcaggcacgatcaccgaggtaaacaaacccgtctccaac
cgcttgaaatcgatcattgtcgcgatggagcgcgagcgctggcttaaacctgaccgcgga
gagcggcatattctggttaaccagactgatttcactgccaagatcgttgacaacggtgat
gtgaccttcgagacgcgatctgtgatcggcaagaacacgcatgaccgccgcagccccgag
ttctcggatgagatggagcatatggtgatcaatccgagctggtacgtgccgcgctcgatc
atcaccaaggagtatttgcccaagctgcagagcaaccccaatgcagtcggccatatccag
atcaccgaccggcgcggccgggtggtgaaccgcggctctgccgatttctcgcagtacaac
gcgcgcaacttcccgttttccatgcgccagccgccgagcagccgcaatgcgctggggctg
gtcaagttcatgttcccgaacaaatacaacatctatctgcacgacaccccgcagaagagt
ctgtttgcccgcgaagtgcgcgctttctcgcacggctgtatccgtctggcgcaaccgttt
gaatttgcttacgcgctgctggcgaagcagagcgaaaaccccaaggatttcttccaccgt
atcctgagcagtggcaaggaaaccaaggtagcgctggagcaaaaagtgccggttcatatt
atctaccggacggcggttgtgacgcgcaaaggccgcgctgagttccgccgcgatgtctat
ggccgcgacgccaaagtttgggcggcgctggagcgggcgggggtggtgctgcctggcgtt
caggggtaa |