Leisingera methylohalidivorans: METH_08735
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Entry
METH_08735 CDS
T02961
Name
(GenBank) transcriptional regulator
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03030
DNA replication
lmd03430
Mismatch repair
lmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METH_08735
03430 Mismatch repair
METH_08735
03440 Homologous recombination
METH_08735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmd03032
]
METH_08735
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_08735
Enzymes [BR:
lmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
METH_08735
DNA replication proteins [BR:
lmd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
METH_08735
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
METH_08735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DAAP1
Motif
Other DBs
NCBI-ProteinID:
AHD00754
UniProt:
V9VSU6
LinkDB
All DBs
Position
1679610..1680131
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AA seq
173 aa
AA seq
DB search
MEPVFIDFEASSLAPKSWPIEVGIAWVDNGRVAVEAKLIRPEPSWSMDDWHPASEKVHGI
PRSALNEAETAGSVAMWLRGKLQGKHVVSDAPEFDQRWLDRLMQSIGGAPDITLDDFDRA
VWWAFSEMDGQVAPGRLHDVYSHLANETTVHRASDDAAKLARAWLAGIRESRE
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgttttcattgatttcgaagcgtcaagtctggcgcccaaaagctggcccatc
gaggttggtatcgcttgggtggacaacggtcgggttgctgtcgaggcgaaactcatccgt
ccggagccgtcctggtcgatggatgactggcatccggcaagcgagaaggtgcacggcatc
cccaggagtgccctgaatgaggcggaaacggcgggaagcgtagcgatgtggcttcggggc
aagctccaaggaaaacacgttgtcagcgatgcgccggaattcgatcagcgttggctcgac
cgtctgatgcaatccatcggtggagcaccggatatcacgctcgacgactttgatcgtgcg
gtctggtgggccttttcggaaatggacggtcaggttgctccaggacgtctgcacgacgtg
tacagccatctggcgaatgaaacgacggtacatcgcgcaagtgacgatgccgccaaactt
gcccgggcatggctggcagggatcagggaaagcagagaatga
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