Leisingera methylohalidivorans: METH_12410
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Entry
METH_12410 CDS
T02961
Name
(GenBank) RNA-binding protein
KO
K06959
protein Tex
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
METH_12410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
OB_PDCD11
T2SSK
HHH_6
DUF460
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHD01373
UniProt:
V9VTP4
LinkDB
All DBs
Position
complement(2380888..2383233)
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AA seq
781 aa
AA seq
DB search
MDTSARISQTIATEIGAAAKQVNAAVALLDEGATVPFVARYRKEATGGLDDTQLRTLAER
LEYLRELEKRRAAIRESIRGQDKLTDDLAASIAKAETKAQLEDIYLPYKPKRRTKAMIAK
ENGLEPLADAILADRNADPEKLAEGYVTEAVATVKDALNGARDILTERLTENAHLLGRLR
EFLQREAVLTAKVIEGKEQEGAKFSDYFAHSERWADVPSHRALAMLRGSNEGVLTLDAGP
EPEEGVARAEAMVAAELDAGGNGPGDAWLRKVAGWTWRVKLSLSMMLELMGDLRGRAQED
AIQVFARNLKDLLFAAPAGARPTLGLDPGIRTGVKAAVVDATGKLVATETLYPFQPKNDL
RGAQVSIVKLIAEHGVELIAIGNGTASRETERMVAEVLNHLPAKVKAPTKVVVSEAGASV
YSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQHKLSKS
LEAVIEDVVNGVGVDLNMASAPLLAHVSGLGPGLAEAIVAHRDLNGAFMSRKELLKVARL
GPKAFEQCAGFLRIRDGKEPLDASSVHPEAYDVARKVVAACGRDIRQIMGDETALKGLRA
EDFVSDKFGLPTVRDILQELEKPGRDPRPSFVTASFKDGVEQITDLKPGMVLEGTVTNVA
AFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKTGQVVKVTVTEVDVPRKRIGLTMRKD
GGASAKEDRNARGPAKGAGPQRGGQPAGGKGKTSASPKGSQGKEQGTGALGAALMDAFKK
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttggacacatccgcccgcatcagccagaccatcgccacagagatcggcgccgccgcgaaa
caggtgaacgccgcggttgcgctgctggacgagggcgcgacggtgccctttgtcgcgcgc
taccgcaaggaggcgacgggcgggctggacgacacccagctgcgtaccctggcggaacgg
ctggagtatctgcgcgagctggagaaacggcgggcggcgatccgcgagtcgatccggggg
caggacaagctgaccgatgatctcgcggcctcgatcgccaaggctgaaaccaaggcgcag
ctggaggatatctatctgccctataagccgaagcggcgcaccaaggcgatgattgccaag
gaaaacgggctggagcctttggcagacgccattctggcggaccggaatgcagatccggag
aaactggccgaaggttatgtcaccgaggcggtggcaacggtgaaagacgcgctgaacggg
gcgcgggatattctgaccgaacgtctgacagagaatgcgcatctgctggggcggctgcgg
gaattcttgcagcgggaggcggtactgaccgccaaagtcatcgagggcaaggagcaggaa
ggcgccaagttctccgactatttcgcgcatagcgagcgctgggccgatgtgccgtcgcac
cgggcactggcgatgctgcgcggatctaacgaaggcgttctgacgctggatgccgggcct
gaaccggaagagggcgtggcgagggccgaggcgatggtggccgcggaactggatgcgggc
ggcaacggtcccggcgatgcctggctgcgcaaggtggcgggctggacctggcgggtgaag
ctgagcctctcgatgatgctggaactgatgggcgatctgcgcggccgggcgcaggaggat
gccattcaggtgtttgcgcgaaacctgaaggacctgctgtttgcggcgccagccggtgcg
cggccgaccctggggctggacccgggcatccgcaccggcgtcaaggcggcggtggttgat
gcaaccgggaaactggtggccacagagacgctgtatccgtttcagccgaagaacgatttg
cgcggcgcgcaggtgtcgatcgtcaagctgattgcagaacacggcgtggagctgatcgcc
atcggcaacggcactgccagccgcgaaaccgagcggatggtggcggaggtgctgaaccat
ctgcctgccaaggtgaaggcaccgaccaaagtggtggtgagcgaggccggcgcctcggtc
tattccgcatccgagcttgcagcgcgggagtttccggacctggatgtgtccttgcgcggc
gcggtgtcgattgcgcggcgcctgcaggatccgctggcggaactggtgaagatcgagccc
aagagcatcggtgtgggccagtaccagcatgatgtggatcagcacaagctgtcgaaatcg
ctggaagcggtgatcgaggatgtggtgaacggtgtgggagtggatctgaacatggcttcg
gcaccgctgctggcgcatgtctcggggcttggccccggcttggcggaggcgattgtcgca
caccgcgacctgaacggggcgttcatgtcccgcaaggagttgctgaaggtcgcgcggctg
ggccccaaggcgttcgagcaatgtgccggattcctgcgcatccgggatggcaaggagccg
cttgatgcgtcctcggtccaccccgaggcctatgatgtggcccgcaaggtggttgcggcc
tgcgggcgcgacatccggcagatcatgggcgatgaaaccgctttgaaaggtttgcgggct
gaagattttgtcagcgataaattcggcctgcccacagtccgggacattttgcaggagctg
gaaaagccgggccgcgacccgcgcccttcatttgtgacggcatccttcaaagacggggtg
gagcagatcaccgacctgaagccgggcatggtgctggaaggcacggtaacgaatgtggca
gcctttggcgcctttgtggatattggcgtgcatcaggacgggctggtgcatgtcagccag
ctggcggaccggtttgtgaaggatccgcatgaggttgtgaagaccgggcaggtggtcaag
gtaacggtcacagaagtggacgtgccgcgcaaacggatcggcctgaccatgcgcaaagat
ggcggtgcgtcggccaaggaagaccgtaatgcgcgcggcccggccaagggtgcagggccg
caacggggcggtcagcctgcaggcggaaaaggcaaaacatctgccagccccaaagggagc
caaggcaaggagcagggaacaggcgcgctgggtgcggcgctgatggatgcctttaaaaag
aagtag
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