Leisingera methylohalidivorans: METH_12535
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Entry
METH_12535 CDS
T02961
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd00470
D-Amino acid metabolism
lmd00550
Peptidoglycan biosynthesis
lmd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
METH_12535
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
METH_12535
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lmd01011
]
METH_12535
Enzymes [BR:
lmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
METH_12535
Peptidoglycan biosynthesis and degradation proteins [BR:
lmd01011
]
Precursor biosynthesis
Amino acid ligase
METH_12535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
AlaDh_PNT_C
KARI_N
Motif
Other DBs
NCBI-ProteinID:
AHD01398
UniProt:
V9VTR5
LinkDB
All DBs
Position
complement(2412275..2413672)
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AA seq
465 aa
AA seq
DB search
MIPVKGYEGAQVAVLGLGRSGLATARALRAGGAEPVCWDDNPAAREAAEADGFTCRDLHK
GGAFDGVAALITSPGIAHLYPKPNPVIRAAMEAGVPVDNDIGLFFRSFADAEWQMHDQPP
RVVAVTGSNGKSTTVALLHHILQEAGRESQLAGNIGRGVLDIDPPGNGGVVVLELSSYQT
ELARALTPDVAVFTNLSPDHLDRHGGMGGYFAAKRRLFAEGGPDRAVIGIDEDEGLFLAG
QLSEAAGDDRVIRISAARKLTGPGWQVFARKGFLSEYRKERQAASIDLRGMTGLPGAHNH
QNACAAYAAARTLGLAPRLIGDAMATFPGLPHRSQTIAESGGVRYVNDSKATNVDSAVKA
LSAFKNIRWICGGLEKDGGLEGLQGQTGNVVKAYVIGREAAGFALQLDVEAEVCTTMAAA
VERAIEDAQEGDTVLLAPAAASFDQYDNFEQRGEDFTAEVNKRLG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcaaaggatatgagggcgcgcaggtggcggtgctggggctgggccgttcg
gggctggcgacagcgcgcgccttgcgggcgggcggggcggaacctgtttgctgggacgac
aaccctgccgcgcgggaggcggcagaggcggatggcttcacctgccgcgacctgcacaag
ggcggtgcctttgacggcgttgctgcgctgatcacctcgcccggcatcgcgcatctgtat
cccaagccgaacccggtgatccgggcggcaatggaggccggggtgccggtggacaatgat
atcgggctgttcttccgctcctttgccgatgccgaatggcagatgcatgaccagccgccg
cgggtggtggcggtgacggggtcgaatggcaaatcgaccacggtggcgctgctgcaccac
atcctgcaggaagcgggccgcgagagccagctggcgggcaatatcggccgcggcgtgctg
gacatagatccgcccggcaacggcggcgtggtggtgctggagctgtcgagctatcagacc
gagctggcccgggcgctgacgccggatgtggcggtgttcaccaacctgagccctgatcat
ctggaccggcatggcggcatgggcggttatttcgcggccaagcggcggctgtttgccgag
ggcgggccggaccgcgcggtgattggcattgacgaggatgaggggctgtttctggccgga
cagctgtcggaagcggcaggcgatgaccgggtgatccgcatctccgccgcgcgcaagctg
accgggccgggctggcaggtttttgcccgcaaaggctttctgagcgagtaccgcaaggag
cggcaggcggcctcgatcgatctgcgcggcatgaccggtctgccgggggcgcataaccat
cagaacgcctgcgcggcctatgcggcggcgcgcactctggggctggcgccgcggctgatc
ggcgatgcgatggcgaccttccccggcctgccgcaccgcagccagaccatcgccgaaagc
ggcggcgtgcgctatgtcaacgacagcaaggccaccaatgtggacagtgcggttaaggca
ctgagtgcgttcaagaacatccgctggatctgcggcgggctggagaaggacggcgggctg
gaagggctgcaggggcagaccggcaatgtggtgaaagcctatgtgatcggccgcgaggcg
gctggctttgcgctgcagctggatgtggaggccgaggtctgcaccactatggcggcagcg
gtcgagcgcgccattgaggacgcgcaggagggcgacacggttctgctggcgccggcagcg
gcgagtttcgaccagtacgacaatttcgaacagcgcggcgaggatttcactgccgaggtg
aacaagcggctgggctag
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