Leisingera methylohalidivorans: METH_12585
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Entry
METH_12585 CDS
T02961
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03420
Nucleotide excision repair
lmd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
METH_12585
03430 Mismatch repair
METH_12585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_12585
Enzymes [BR:
lmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
METH_12585
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
METH_12585
MMR (mismatch excision repair)
Other MMR factors
METH_12585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHD01408
UniProt:
V9VTS3
LinkDB
All DBs
Position
complement(2424580..2426973)
Genome browser
AA seq
797 aa
AA seq
DB search
MSSFDEMDAFEGASLSARAMGARPMPYLDGLNPAQREAVECLDGPVLMLAGAGTGKTKAL
TTRIVHLLSTGRVRPNEILSVTFTNKAAREMKERVAAMLGQAVEGMPWLGTFHSVCVKLL
RRHAELAGLKSNFTILDTDDQIRLLKQLIKAEGIDDKRWPARMLAGIIDDWKNRALTPEK
VPAADAGAYNSRGTQFYTQYQTRLRELNAVDFGDLLLHMVTIFQNHPDVLEQYQRWFRYI
MVDEYQDTNVAQYLWLRLLAGAHKNVCCVGDDDQSIYGWRGAEVGNILRFEKDFPGAMVV
RLEQNYRSTGHILAAAANVIRGNQGRLGKELWTAAGDGEKVRLIGHWDGEEEARWIGEEI
EAMQRGTRGQSPTGLNSMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRVVVSPDDDLAFERIVNTPKRGLGDKAQQTIQGIARENGVSLVEGARLAVEGGLIKG
KGGGALRQLVEGIARWGRMAGDADITHMELAGIILDESGYTAHWQNDKNPDSPGRLENLK
ELVKALENFENLQGFLEHVSLVMDNDKQDADEKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGLKGLEEERRLAYVGITRAEQICTISFAGNRRVFGQWQSQLPSRFIDELPE
EHVEVLTPPGLYGGGYGAAAPASTMGGAMSDTVGGGQVRSTIEEKMAQADGYNSPGWKRM
QARAGARGLSQPKESKHQVIDLTATSSFTLGERVFHQKFGYGAITGIEGDKLEVAFEKAG
TKKVVARFVSATDDVPF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgacgaaatggacgcctttgagggcgcatcattgtcggcccgcgccatg
ggtgcgcggccgatgccctatctggacggcctcaacccggcgcagcgcgaagcggtggaa
tgcctggacggcccggtgctgatgctggcaggggcgggcactggcaagaccaaggcattg
accacgcggattgtgcatctcctcagcaccggccgggtgcgcccgaacgagatcctgtcg
gtaaccttcaccaacaaggccgcccgcgagatgaaagagcgtgtggctgcaatgctgggc
caggcggtcgaagggatgccgtggcttggcaccttccattcggtctgtgtgaaactgctg
cgccgccatgcggaactggcggggctgaaatccaacttcaccattctggacaccgacgat
cagatccggttgctgaagcagctgatcaaggcggaaggcatcgacgacaaacgctggccc
gcgcggatgctggcgggcatcatcgacgattggaaaaaccgcgccttgacgcctgagaaa
gtgccggcggccgatgccggcgcctacaacagccgcggcactcaattctacacccagtac
cagacccgcctgcgcgagctgaacgcggtggatttcggcgacctgctgctgcacatggtg
acgatcttccagaaccacccggacgtgctggagcagtatcagcgctggttccgttacatt
atggtggatgaatatcaggataccaacgtcgcccagtacctctggctgcggctcttggcc
ggtgcgcataagaatgtctgctgcgtcggcgacgacgaccagtcgatctacggctggcgc
ggcgccgaggtcggcaacattctgcggttcgaaaaggactttcccggtgccatggtggtg
cggctggagcagaactaccgctccaccggccatattctggcggcggcggcaaacgtgatc
cgcggcaatcagggccgtctgggcaaagaactgtggacggccgccggcgacggcgaaaag
gtccgcctgatcggccattgggacggcgaggaagaggcccgctggatcggtgaggagatc
gaggcgatgcagcgcggcacccgcggccagtcgccgaccggcctcaacagcatggcgatt
ctggtccgcgcctcgcaccagatgcgcgcgttcgaggaccgctttctgaccatcggcctg
ccgtaccgggtgatcggcggcccgcgattctatgaacggctcgaaatccgcgacgcgatg
gcctatttccgcgttgtggtttcccccgacgacgatctggcgttcgaacgcatcgtcaac
acccccaaacgcggccttggcgacaaggcgcagcagaccattcagggcatcgcccgcgaa
aacggcgtctcgctggtcgagggcgcccggctggcggtcgagggcggcttgatcaagggc
aagggcggcggcgccctgcgccagctggttgagggcatcgcccgctggggccggatggcc
ggcgatgccgacatcacccatatggagctggccgggatcatcctggacgagagcggttac
accgcccattggcagaacgacaagaacccggattcgccgggccgtctggaaaacctcaag
gaactggtcaaggcgctggaaaatttcgaaaatctccagggcttcctcgaacatgtcagc
ctggtgatggacaatgacaagcaggacgcggacgagaaggtctcgatcatgaccctgcac
gccgccaaggggctggaattccccgcggtgttcctgccgggctgggaggacgggctgttc
ccctcgcagcgctcaatggatgaaagcggcctcaaggggctcgaggaggaacgcaggctg
gcctatgtcggcatcacccgggccgagcagatctgcaccatttcctttgctggcaaccgg
cgggtgttcgggcaatggcaatcgcagctgccctcgcgtttcatcgacgaacttcccgag
gagcacgtcgaagtgctgaccccgccgggcctctatggcggcggctacggggcggcagca
ccggccagtactatgggcggcgccatgagcgatactgtgggcggcggccaggtccgttcc
accattgaagagaaaatggcccaggccgatggctacaactcgccgggctggaagcggatg
caggcgcgcgcaggcgcgcgcgggctgtcgcagcccaaggaaagcaagcatcaggtgatc
gacctcaccgccacctccagtttcaccctgggcgaacgggtgttccaccagaaattcggc
tatggcgccatcaccggcatcgagggcgacaagctggaagtggcgttcgagaaggccggc
accaagaaagtggtcgcccgcttcgtttccgccaccgacgacgtgccattctga
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