Leisingera methylohalidivorans: METH_12625
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Entry
METH_12625 CDS
T02961
Name
(GenBank) XorII very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_12625
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
METH_12625
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
AHD01413
UniProt:
V9VTS6
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All DBs
Position
2434684..2435097
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AA seq
137 aa
AA seq
DB search
MADTLTPERRSANMAKIRAKHTKPEMLVRRMVHGMGFRYRLHRKDLPGKPDLVFGPRRKV
IFVHGCFWHLHKCRDGRIPASRRDYWEPKLLRNTQRDAQQQAALQAAGWQVLILWECETK
DQDALQNRLRDFLQNEK
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaccctgacacccgagcggcgcagcgccaatatggcaaagatccgcgccaag
cacaccaagccggagatgctggtgcggcggatggtgcacgggatgggctttcgctaccgg
ctgcatcgcaaggacctgccgggcaagcccgatctggtgttcggcccgcgccgcaaggtg
atctttgtgcatggctgtttctggcacctgcataagtgccgcgacgggcgcatccccgcc
agccgccgggactattgggaacctaaactgctgcgcaacacccagcgcgacgcgcaacag
caggccgcgctgcaggcggccggctggcaggttctgatcctctgggaatgcgagaccaag
gatcaggacgccttgcaaaaccggttgcgggatttcctgcaaaacgaaaaatag
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