Leisingera methylohalidivorans: METH_13710
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Entry
METH_13710 CDS
T02961
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmd03032
]
METH_13710
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_13710
Enzymes [BR:
lmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
METH_13710
DNA replication proteins [BR:
lmd03032
]
Prokaryotic type
DNA Topoisomerases
METH_13710
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
METH_13710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AHD01607
UniProt:
V9VXK4
LinkDB
All DBs
Position
2643003..2645630
Genome browser
AA seq
875 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSNYTVLASYGHVRDLPAKDGSVDTEADFGMTWEVGNDSRK
HVKAIADALKEDNALILATDPDREGEAISWHLQEALTKRRSIKKDTAVSRVTFNAITKEA
VTEAMQNPREVDMPLVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVE
REMEIEAFNAQEYWSVRAQMATPRGQEFEARLTVLGGDKLDKYSLKNSTAAELAVQAVAS
RQLSVLSVEAKPASRNPSAPFMTSTLQQEASRKFGMGARQTMNAAQRLYEAGHITYMRTD
GIDMAPEAVQAARAEIETRYGAEYVPSSPRIYKNKAKNAQEAHECIRPTDMSRDAASLKV
TDDDQRKLYDLIWKRTLSCQMEGARLERTTVEIGSDDKQVVLRATGQVMLFDGFMRVYEE
GRDDVADEDDKRLPQIMEGEALKFASSLAAQADKAGKEASVLSKDGAVLALQHHTQPPPR
YTEATLVKRMEELGIGRPSTYASVITTIQDREYVRKDKNRLFPEDKGRIVTIFLLNFFRK
YVGYEFTANLEEELDDVSAGQRDYKDLLGKFWRDFSAAISETSDLRITEVLDVLDAALAP
QLYPPREDGSDPRICPKCGAGQLHLKTSRTGGFVGCGNYPECTYTRPIAGEGADGDERLL
GMDGEDEIHLKAGRFGPYVQRGEATPENKKPPRASLPKGWNKDDMDLEKALTLLSLPRQI
GDHPEGGVISSNFGRFGPYLMHQMPEEEKPVYANLKDPNDVFEIGMNRAVELLAEKRANP
GRRGSRAAAKPLKELGDHPDSGGAINIMDGRYGPYVKWEKVNATLPKDVEPKDVTIEMAV
ELIAEKSAKGGKKKAAAKKPAAKKKAAPKKAAAKD
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagtcgttgtcgaatccccggccaaagcaaagacaatcaacaaatatcttggc
tccaactatacggttctggcgtcttacgggcatgtgcgcgacctgccggccaaggatggc
tcggtcgataccgaagccgatttcggcatgacctgggaggtcggcaatgattcccgcaag
cacgtcaaggcgattgccgacgcgctgaaagaggacaatgcgctgattctcgccaccgac
cccgaccgcgagggcgaggcgatcagctggcatctgcaggaggcgctgaccaagcggcgc
tcgatcaagaaggacaccgcggtcagccgggtgaccttcaacgcgatcaccaaggaagcg
gtgaccgaggcgatgcagaacccccgcgaagtcgacatgccgctggtcgaggcctatctc
gcccgccgcgcgctggactatctggtggggttcaacctgtcgccggttctgtggcgcaag
ctgccgggcgcgcgttccgcaggccgggtgcaatccgtctgcctgcgcctgatcgtcgag
cgcgagatggaaatcgaggcgttcaacgcgcaggaatactggtcggtgcgggcacagatg
gcgaccccgcgcggccaggagttcgaggcgcgcctgacggtgctgggcggcgacaagctg
gacaaatacagcctgaaaaactccaccgccgcggaactggcggttcaggccgtggcatcg
cgccagctgtcggtgctgtcggtcgaggccaagcctgcctcccgcaacccttctgccccg
ttcatgacctctaccctgcaacaggaggccagccgcaaattcggcatgggcgcgcgccag
accatgaacgccgcccaacgcctgtatgaagccggccacatcacctatatgcggaccgat
ggcatcgacatggcgccagaggcggtgcaggccgcccgggccgagatcgaaacgcgttac
ggcgcagaatatgtgccgtcctctccgcggatctataagaacaaggcgaagaacgcccag
gaagcgcacgaatgtatccgcccgacggatatgagccgcgacgcggccagcctgaaagtc
acggatgacgatcagcgcaagctgtatgacctgatctggaagcgcactctgtcgtgccag
atggaaggtgcccgtctggaacgcaccaccgtcgaaatcggctcggatgacaaacaggtc
gtgctgcgcgccaccggacaggtgatgctgtttgacggtttcatgcgggtgtatgaagaa
ggccgcgatgatgtggccgacgaggacgacaagcgcctgccgcagatcatggaaggcgaa
gcgctgaaatttgcgtcttcgctggcggcccaggctgacaaggccggcaaagaggcatcc
gtgctttctaaggacggcgccgtgctggcgctgcagcaccacacccagccgccgccgcgc
tatacagaagcgacactggtgaagcgcatggaagagctgggcatcggccgcccctcgacc
tatgcctccgtcatcaccacgatccaggaccgcgagtatgtccgcaaggacaagaaccgg
ctgttccccgaagacaaaggccggatcgtcaccatattcctgctgaatttcttccgcaaa
tacgtaggctatgaattcaccgccaatctggaagaagaactggatgacgtcagcgcagga
cagcgcgactacaaggacctgctgggcaagttctggcgcgatttttccgccgccatttcg
gaaacctccgatctgcgcatcaccgaggtgctggacgtgctggacgcagcacttgcgccg
cagctctatccgccgcgcgaagacggcagcgacccgcgcatctgccccaaatgcggcgcg
ggccagctgcatttgaaaacctcgcgcaccggcggctttgtcggttgcggcaattacccg
gaatgcacctacacccgtcccatcgccggcgaaggggctgatggcgatgaacgcctgctg
ggcatggacggcgaagatgaaatccatctgaaggccggccgctttggcccttatgtgcag
cgcggcgaagcaacgcccgagaacaaaaaaccgccgcgcgccagcctgcccaaaggctgg
aacaaggacgatatggacctggagaaggcgctgaccctgctcagcctgccgcgccagatc
ggcgatcaccccgaaggcggcgtgatttcttccaacttcggccgcttcggcccctatctg
atgcatcagatgccagaggaggaaaaaccggtttacgccaacctcaaggaccccaatgat
gtctttgaaatcggcatgaaccgggcggtggaactgctggcagaaaaacgcgccaacccg
ggccgccgcggcagccgcgccgccgccaagccgctgaaggaattgggcgatcaccccgac
agcggcggtgccatcaatatcatggacgggcgctacgggccttacgtcaaatgggagaag
gtgaacgccaccctgcccaaggatgtcgaacccaaggacgtgaccatagagatggcggtg
gagcttattgcggaaaaatccgcaaagggcggcaagaagaaagccgcagccaaaaagccc
gcagccaagaaaaaagccgcgccgaagaaggccgcggcaaaagactga
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