Leisingera methylohalidivorans: METH_13915
Help
Entry
METH_13915 CDS
T02961
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
METH_13915 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_13915 (ruvB)
Enzymes [BR:
lmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
METH_13915 (ruvB)
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
METH_13915 (ruvB)
RecFOR pathway proteins
METH_13915 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_3
Mg_chelatase
AAA_22
AAA_14
RNA_helicase
TsaE
Rad17
AAA_2
AAA_17
AAA_33
NTPase_1
nSTAND3
AAA_18
NB-ARC
NACHT
Parvo_NS1
ABC_tran
AAA_28
Bac_DnaA
NPHP3_N
AAA_11
Cytidylate_kin
AAA_24
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AHD01645
UniProt:
V9VWA9
LinkDB
All DBs
Position
complement(2682155..2683186)
Genome browser
AA seq
343 aa
AA seq
DB search
MIDADPALRPEPLPEDTAPDGDRALRPQGLGEFIGQAEARANLKVFIESARRRGEAMDHT
LFHGPPGLGKTTLAQIIARELGVNFRMTSGPVLAKAGDLAAILTNLEASDVLFIDEIHRL
NPAVEEVLYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATTRMGLLTTPLRDRFGIP
TRLQFYTIDELFEIVRRNARKLGAPADDAGAREIARRARGTPRIAGRLLRRVVDFAVVEG
DGTITRELADGALTRLGVDQLGLDGADRRYLTLLAENYGGGPVGIETISAALSESRDALE
EVIEPYLLQQGLIQRTPRGRMLAQKAWTHLGMAPPRSRNDLFG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgccgaccccgccctgcgccccgaaccgctgcccgaggatactgcgcctgac
ggggaccgcgccctgcgcccgcaggggcttggcgaattcatcggccaggccgaagcccgc
gccaatctgaaggtcttcatcgaatccgcccgccgccgcggcgaggcgatggaccacacg
ctgtttcacggccctcctggccttggcaagaccacgctggcgcagatcatcgcccgtgaa
ctgggggtgaatttccggatgacctccggcccggtgctggccaaagccggcgatctggcg
gcgatcctcaccaatctcgaagccagcgacgtgctgttcatcgacgaaatccaccggctg
aacccggcggtggaggaagtgctctatccggcgatggaggattttgagctggatctggtg
attggcgaaggccctgcagcgcgcaccgtgcggatcgaactgcagccctttaccctggtc
ggggccaccacccgtatgggtctgctgaccacaccgctgcgcgaccgcttcggtatcccg
acccggctgcagttctataccattgacgagctgttcgagattgtccgccgcaatgcccgc
aaactgggggcccctgcggatgatgcaggcgcccgcgagatcgcgcggcgcgcccgcggc
acccccaggatcgccgggcggctcttgcgccgcgttgtggacttcgcggttgtggagggc
gatggcacgatcacccgcgaactggccgatggcgcgctgacccggctgggggtggatcag
ctggggcttgacggcgccgaccggcggtatctgaccctgctggccgagaattacggcggc
ggaccggtggggatcgagacgatttcggccgccttgtccgagagccgcgacgcgctggaa
gaggtgattgaaccttacttgctgcagcaggggctgatccagcgcaccccgcgcgggcgg
atgctggcgcaaaaggcctggacccacctgggaatggcgccgccgcgctcccgcaacgat
ctgttcgggtag
DBGET
integrated database retrieval system
