Leisingera methylohalidivorans: METH_15430
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Entry
METH_15430 CDS
T02961
Symbol
dppF
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
METH_15430 (dppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmd02000
]
METH_15430 (dppF)
Transporters [BR:
lmd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
METH_15430 (dppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_21
nSTAND1
AAA_16
AAA_5
SMC_N
AAA_29
AAA
Mg_chelatase
PRK
Rad17
RNA_helicase
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AHD01890
UniProt:
V9VX05
LinkDB
All DBs
Position
complement(3002430..3003473)
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AA seq
347 aa
AA seq
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MKNAKADRPLLEIRNLAKQFDLDQGFLETLKFKQGKIVRETRSVHAVNNVSLEVGRGEAL
CVVGESGCGKSTVARLVAGLLTPTAGEIHYDGQRIDNLSRSGMQPLRKKIQMIFQNPYAS
LNPRMTIRQALEEPVRHHFPAASAAEVRDKVTEVMLSVGVDPSWAKRYPHEFSGGQRQRI
AIARALTVDPEFIIADEPISALDVSIQAQVLNLMLEAKESRGLTYLFITHDLSVVEHFGT
RVAVLYLGSVCEVADTATLFSNPKHPYTRALLSAVPQLKDDRPNHIRLKGEIPTPINLPQ
GCPFQSRCAFADARCKSEQPKAIHQPDGSLVACHAVQEDRLDAVAAG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgcaaaggcagaccgcccgctgttggaaatcagaaatctggcaaaacagttc
gacctggatcagggctttctggaaacccttaagttcaaacagggcaagatcgtgcgggaa
acccgatcggtccatgcggtgaacaatgtctcgcttgaagtgggccgcggcgaggcgctt
tgtgtggtcggcgagtcgggctgcggcaagtcgacagtggcgcggctggtggccggtctg
ctgacccccaccgcaggcgaaatccattatgacggccagcggatcgacaatttgtcgcgc
agcggcatgcagcccctgcgcaagaagatccagatgatctttcagaatccctacgcctcg
ctcaatccgcgcatgaccatccgtcaggcgctggaggaacccgtgcgccaccactttccc
gccgcctcggcggcggaggtgcgcgacaaggtcaccgaggtgatgctgtcagtcggtgtc
gatcccagctgggccaaacgctacccgcatgaattctccggcggccagcgccagcggatt
gccattgcccgcgccctgacagtggaccctgaattcattatcgccgatgagccgatcagc
gcgctggacgtgtcgatccaggcgcaggtgctgaatctgatgctggaagccaaggaaagc
cgcggcctgacctatctgttcatcacccacgatctgagcgtggtagagcacttcggcacc
cgtgtcgcggtgctttaccttgggtcggtttgtgaggtcgcggacacggcaacgttgttc
tccaaccccaaacacccttatactcgggccttgctgtccgcggtgccgcagctgaaggat
gaccggccgaaccatatccgcctcaagggtgagatcccgacgccgatcaatctgccgcaa
ggctgtcccttccaaagccgctgcgcctttgcggacgcacgatgcaagagtgaacagcca
aaagccattcaccagcccgatggcagccttgttgcctgccatgctgtccaggaagacagg
ctggatgcggtggccgccggttaa
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