Leisingera methylohalidivorans: METH_15595
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Entry
METH_15595 CDS
T02961
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmd03016
]
METH_15595
Enzymes [BR:
lmd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
METH_15595
Transfer RNA biogenesis [BR:
lmd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
METH_15595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AHD01920
UniProt:
V9VX27
LinkDB
All DBs
Position
complement(3039412..3040734)
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AA seq
440 aa
AA seq
DB search
MSAPKKLFIKTYGCQMNVYDSERMAEALGGEGYVETKSADDADMILLNTCHIREKAAEKV
YSELGRFKGLKAEKPDLKIGVAGCVAQAEGEEIMRRQPLVDLVVGPQSYHRLPEMEAKTR
EGEKVLDTDFPEEDKFEKLKNRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPA
DRILTEARDLVERGVREITLLGQNVNAYHGAGPNGDLTLAQLIWELDKVDGLERIRFTTS
HPNDMQDDLIEAHGTCAKLMPYLHLPVQAGSDKILKRMNRAHTAESYLRLIERIRAARPD
ILISGDFIVGFPEETEEDFQATMDLVEEVKYGTAYSFKYSTRPGTPAAERAQVDPAAADD
RLQRLQTLLTKQQREVQDSMVGREVGVLFEKAGRLPGQMVGKSDYLHAVHVADCNRAAGD
LARVRIISSGANSLAGELIG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccccgaagaagctgtttatcaagacctatggctgtcagatgaatgtctatgac
agcgaacgcatggccgaggcgctgggcggtgaaggctatgtcgagacaaaatcggccgat
gacgccgatatgatcttgctcaatacctgccatatccgggaaaaagcagccgagaaagtc
tattccgaactgggccgtttcaaagggctgaaggcggaaaagcccgacctcaagatcggc
gtcgccggctgtgtcgcccaggccgagggcgaggagatcatgcgccgccagccgctggtg
gatctggtggtcggcccgcaaagctatcaccgcctgcccgagatggaagccaaaacgcgg
gaaggggagaaggtgctggacaccgattttcccgaggaagacaagttcgaaaaactgaag
aaccgccccaaggccaagcgcggcccgacggcgtttctgaccgtgcaggaaggctgcgac
aaattctgtgccttctgcgtggtgccctatacccgcggtgccgaggtgtcgcgcccggcg
gaccgcattctgaccgaagcccgcgatctggtggagcgcggcgtgcgcgaaatcaccctt
ctgggtcagaatgtgaacgcctatcacggagccggccccaatggcgacctgaccctggcg
cagctgatctgggaactggacaaagtcgacgggctggagcgtatccgcttcaccacctcg
catcccaatgacatgcaggatgacctgatcgaggcgcatggcacctgcgccaagctgatg
ccctacctgcatctgccggtgcaggcgggatcggacaagatcctgaagcggatgaaccgc
gcgcacaccgccgaaagctacctccgcctgattgagcgcatccgcgccgcgcggcccgac
atcctgatctccggcgacttcattgtcggctttccggaagagaccgaggaagatttccag
gccaccatggacctggtggaggaagtaaaatacggcaccgcctattccttcaaatattcg
acccgccccggcaccccggctgccgaacgtgcgcaggtagacccggccgcggccgacgac
cggctgcagcgcctgcagactctgctcaccaagcagcagcgtgaggtgcaggacagcatg
gttggccgcgaggttggcgttctgtttgaaaaggcgggccgtcttcccgggcagatggtt
ggtaaatccgactacctccatgccgttcatgtcgctgattgcaaccgcgcggcgggcgac
ctggcccgggtgcgcatcatttcctctggcgcaaattcactggcaggggaattgatcggc
tga
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