Leisingera methylohalidivorans: METH_16260
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Entry
METH_16260 CDS
T02961
Name
(GenBank) TonB-denpendent receptor
KO
K16092
vitamin B12 transporter
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmd02000
]
METH_16260
Transporters [BR:
lmd02000
]
Other transporters
Pores ion channels [TC:
1
]
METH_16260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AHD02027
UniProt:
V9VYN6
LinkDB
All DBs
Position
3171982..3173868
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AA seq
628 aa
AA seq
DB search
MSKASLSLAAALTAAAPALATAQDAEITDLGEIIVSGGFTPVEAQKYGRSASVLTSEEIE
DRGLTTVQDALRSVPGLMVSGSGDSFTQVRIRGAEANHTLILIDGVEASGGDSEYILSGL
DTANIERIEVLRGPQSVFYGSNASAGVINIITRTGGTGTEYGGSAEAGSDGYRASARVSS
RTERGGVSFSLAHDNDDGYDISGDGGEKDGIRRNTLQLKGDQLVNGRLKLGFNFRTSDER
YDGDSTSFTATDSASYVVDDPTQFSDRDEQLAQVYAELDTLGGRLKHRLSLERTDFDRSF
NGGTPTETKTEAAKYLLSFGLDGRPADQADHLLNAILEWEEDSSSTNPAFARETNSFALE
YRGSFANGLDLQLGVRHDSNSVFEDATSWTASASYIFAGSGVRLHSSAGTGVVNPSYFEL
FANSTFGSTTYLGNPGLQPEENRSFDFGVEVPFLQGRGLVDVTYFDETLTGEIESYMVNA
TTISYRNQAGDSDRKGVELAASLEATENLGLRLSYTYLDASNPNGSVEIRRPEHELLLSA
TLDTVNGRGSITTDIRHVAGNWDTQFFNSSTVAELDDYTTVNVSAQYQLTDNVVLTGRVS
NLFDEDYADVWGYAKRGRAAYIGVRASF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcaagcctgtccctggccgcggccctgaccgccgccgcccccgcactcgca
actgcccaggacgcagagatcaccgatctgggggaaatcatcgtctccggcggcttcacc
ccggttgaagcgcagaaatacggccgctctgcctcggtcctgaccagcgaggagatcgaa
gaccgcggcctcaccaccgttcaggatgcgctgcgctcggttcccggcctgatggtgagc
ggctccggcgacagctttacccaggtccgcatccgcggcgccgaagccaaccacacgctg
atcctgattgacggcgtcgaggcctccggcggcgacagcgaatacatcctgtccgggctg
gacaccgccaatatcgagcgcattgaggtgctgcgcggcccgcaatcggtgttctacggc
tccaacgcctcggccggcgtgatcaacatcatcaccaggaccggcggtaccggcacagaa
tacggcggcagcgctgaggcgggttcggacggctaccgtgcctcggcgcgggtttcgtcg
cgcaccgaacgcggcggtgtctccttcagcctggcgcatgacaacgacgacggctacgac
atctctggcgacggcggcgaaaaggacggcatccgccgcaacaccttgcagctgaagggc
gaccagctggtcaacggccggctgaagcttggcttcaacttccgcacctcggacgagcga
tatgacggcgatagcacctctttcaccgcaacggactcggccagctatgtcgtggatgat
cccacgcaattcagcgaccgcgatgaacagctggcccaggtatatgccgagcttgacacg
ttgggcggccgcctgaaacaccggctgtcgctggagcgcactgactttgaccgatccttc
aatggcggcaccccgaccgaaaccaagaccgaagcagcaaaatacctgctgagctttggc
ctggacggacggccggcagatcaggcagaccaccttctgaacgcaattctggaatgggaa
gaggattccagcagcaccaacccggcctttgcgcgcgaaaccaactcatttgccctggag
taccgcggcagctttgccaatggcctggatctgcagcttggggtgcgccacgacagcaac
agcgttttcgaagacgcaaccagctggacggcgagtgcttcctacatatttgctggcagc
ggcgtgcgtctgcacagctcggcgggaactggcgtcgtgaatccctcttactttgagctg
tttgccaacagtacctttggctccaccacctatctcggcaacccgggcctgcaaccggag
gaaaaccgcagcttcgactttggggttgaggtgccattcctgcaggggcgcggactggtc
gatgtgacctatttcgacgaaacgctgacgggtgaaatcgagagctacatggtgaacgcg
accacgatctcctaccgcaaccaggccggtgacagtgatcgcaaaggtgttgagctggca
gcaagcctggaggccaccgaaaacctcggcctgcgcctctcctacacctatctggacgcc
agcaaccccaacggctcggttgaaatccgccgtccggagcatgagttgctgctcagcgct
acgctggataccgtcaacggccgcggttccatcaccaccgacatccggcatgttgcgggc
aactgggacactcagtttttcaactccagcacggttgccgaactcgacgattacaccact
gtcaacgtctcggcccagtatcagctgacagacaatgtggtgctgaccgggcgcgtcagc
aacctgttcgacgaggactatgctgacgtctggggctacgccaagcgcggccgtgccgcc
tatatcggcgtgcgggcctcgttctga
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