Leisingera methylohalidivorans: METH_17690
Help
Entry
METH_17690 CDS
T02961
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
METH_17690 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmd03019
]
METH_17690 (groEL)
03110 Chaperones and folding catalysts [BR:
lmd03110
]
METH_17690 (groEL)
03029 Mitochondrial biogenesis [BR:
lmd03029
]
METH_17690 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmd04147
]
METH_17690 (groEL)
Enzymes [BR:
lmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
METH_17690 (groEL)
Messenger RNA biogenesis [BR:
lmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
METH_17690 (groEL)
Chaperones and folding catalysts [BR:
lmd03110
]
Heat shock proteins
HSP60 / Chaperonin
METH_17690 (groEL)
Mitochondrial biogenesis [BR:
lmd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
METH_17690 (groEL)
Exosome [BR:
lmd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
METH_17690 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
METH_17690 (groEL)
Exosomal proteins of breast cancer cells
METH_17690 (groEL)
Exosomal proteins of colorectal cancer cells
METH_17690 (groEL)
Exosomal proteins of bladder cancer cells
METH_17690 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHD02221
UniProt:
V9VTZ0
LinkDB
All DBs
Position
complement(3456328..3457953)
Genome browser
AA seq
541 aa
AA seq
DB search
MSAKDVKFGTDSRHRMLKGINTLANAVKVTLGPKGRNVVLEKSWGAPRITKDGVTVAKEI
TLSDPFENMGAQMVKDVASRTNEEAGDGTTTATVLAQAIIKEGMKSVAAGMNPMDLKRGI
DKAVVAVVAEVKEMSRPVGDTDEIAKVGTISANGESAIGRQIADAMAKVGNEGVITVEEN
KGLETETEVVEGMQFDRGYLSPYFVTEAEKMRVSLEDCVILLHEKKLTSLAPMVPLLEAV
IQADKQLLVVAEDIDGEALAMLVVNKLRGGLKVAGVKAPGFGDRRTAMLEDLAILTGGQV
ISEELGIKLENVTLDMLGAAKKITITKDATTVIDGAGVKAAIAARVTQIRTQIEDTTSDY
DKEKLQERLAKLAGGVAVIKVGGATEIEVKERKDRVDDALNATRAAVQEGVVPGGGVALV
HAGKVLTGLTGDNADQTAGIAIIRKALQAPLRQIAENAGVDGSVVAGKIVENTSKTFGYD
AQADTYGDMLKAGVIDPTKVVRIALQYAASVAGLLVTTEAMVADRPARSGTNDMADMDSL
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaagacgtcaagtttggcacagactcccgtcaccgcatgctcaagggtatc
aacaccctcgccaacgccgtcaaggttacactgggtcccaagggccgcaacgtcgtcctg
gaaaaatcctggggcgcaccgcgcatcaccaaggacggtgtcaccgtcgccaaggagatc
accctgtccgacccgtttgagaacatgggcgcacagatggtcaaggatgtcgcgtcgcgc
accaatgaagaagctggcgacggcacgaccaccgcaacggttttggcacaggccataatc
aaggaaggtatgaaatctgtcgctgcgggcatgaacccaatggatctcaagcgtggcatc
gacaaagcagtggtcgccgtagtggccgaggtcaaagagatgtcgcgcccggtcggcgac
accgatgaaattgccaaggtcggtacgatttcggccaatggcgaatccgcgattggccga
cagatcgccgacgcgatggcaaaggttggcaacgaaggcgtcatcaccgtcgaagaaaac
aagggcctggaaactgaaacggaagtcgttgaaggtatgcaattcgaccgcgggtatctt
agcccctacttcgtcacagaagccgagaaaatgagggtgagcctggaagactgcgtcatc
ctgctgcacgagaaaaagctgacctctctggccccgatggtgcccctgctcgaagcggtt
attcaagcggacaagcagctcttggttgtcgctgaggatatcgacggcgaagcgctcgca
atgctcgttgtgaacaagctccgtggcggtttgaaggttgcgggcgtcaaggcacccggc
ttcggggatcgtcgcacggcgatgctggaagacctcgctattcttacaggcggccaggtc
atttccgaagaactcggcattaagctcgagaatgtcacactggacatgctgggcgccgcc
aagaagatcactatcaccaaagacgcaacaaccgtgattgacggggcgggcgtcaaggcc
gccattgccgcacgcgtgacgcaaatccgcacgcagatcgaagacaccacgtcagattac
gacaaagaaaagctgcaggaacgtctcgcgaaactcgcaggcggggtcgccgttatcaag
gtgggtggtgcgacagaaattgaagtcaaggagcgtaaggaccgcgtcgatgacgccctg
aacgcaacgcgcgcggccgtccaggaaggcgttgttcccggcggcggtgttgctttggtc
catgccgggaaagtgctgaccggtcttacgggtgacaatgcggaccagacggctgggatt
gccatcatccgcaaggcgctccaggctccgcttcggcagatcgctgagaatgcaggcgtt
gacggatcggtcgttgccggaaagatcgtcgagaataccagcaaaacgttcggctacgat
gcgcaggcagacacatacggagacatgctgaaggcgggtgtcatcgaccccacgaaggtt
gttcgaattgcgcttcagtacgcggcctctgtcgcaggcctgctcgtgacaaccgaagcg
atggttgccgaccgaccggcgagatccggcacaaacgacatggctgacatggatagcctg
atgtag
DBGET
integrated database retrieval system
