Leisingera methylohalidivorans: METH_18835
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Entry
METH_18835 CDS
T02961
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03030
DNA replication
lmd03410
Base excision repair
lmd03420
Nucleotide excision repair
lmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METH_18835
03410 Base excision repair
METH_18835
03420 Nucleotide excision repair
METH_18835
03440 Homologous recombination
METH_18835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmd03032
]
METH_18835
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_18835
Enzymes [BR:
lmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
METH_18835
DNA replication proteins [BR:
lmd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
METH_18835
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
METH_18835
NER (nucleotide excision repair)
GGR (global genome repair) factors
METH_18835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Ribosomal_60s
DNA_polI_exo1
Taq-exonuc
Peptidase_M32
Motif
Other DBs
NCBI-ProteinID:
AHD02398
UniProt:
V9VWS8
LinkDB
All DBs
Position
3696744..3699548
Genome browser
AA seq
934 aa
AA seq
DB search
MSGTQFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLFKQVEDNKGP
DAPTHVAVIFDYSGKSFRNEMYDQYKANRPPAPEDLVPQFPLTREATRAFNIACKEVEGF
EADDIIATLAHQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDSDGVVEKFGVG
PDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGDLETLLDRAEEIKQPKRRQTLID
KREQIELSKKLVQLDCSMELDFTLDDLEVMEPDAETLLTFLSEMEFRTLTKRLADQLGMD
APAIPEAPAAAAAAAAAPDSVPFDKEKYECVRDAAGLQAWVDRIRQRGWVAVDTETTGLD
EMVVDLVGISLCVEPGEACYIPLAHKAGGDDLFGGEGLSEGQMPLEEAVAILKGVLEDPA
VLKIGQNMKYDAKILHRYGVDVAPIDDTMLMSYALHAGMHGHGMDTLSERYLDHTPIPIK
PLLGSGKSAITFDRVPIEDAVPYAAEDADITLRLWQTFKPQLHQERVTTVYETLERPLVP
VLADMERNGIKVDRDTLSRMSNAFAQKMAALEAEIHELAGQTFNVGSPKQLGEILFDKMG
IEGGKKGKTGAYATGADILEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHINPDTGRV
HTSYAQTGASTGRMASTDPNLQNIPVRTEEGRRIREAFVAEEGNVLLSLDYSQIELRILA
HMAGIDALKQAFAEGQDIHAMTASEMFEVPLDEMTPEIRRQAKAINFGVIYGISGFGLAR
NLRIPRKDAQGFIDRYFERFPGIRRYMDQTVEFAKEHGFVQTLFGRKIHTAEINAKGPKA
GFAKRAAINAPIQGTAADVIRRAMVRMPEAIAHLPARMLLQVHDELLFEVPESAVEETIE
TARRVMETAADPAVHLDVKLVVDAGRGQNWAEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggacacaattcggcaagggctgccatctgcatctgatcgacggctcggccttc
atcttccgcgcctatcacgcgctgccgcccttgacgcgcaaatccgacgggctgccgatc
ggcgccgtggccgggttctgcaacatgctgttcaagcaggtcgaggacaacaaaggcccg
gatgcgccgacccatgtggcggtgattttcgactattccggcaagtcgttccgcaacgag
atgtacgaccagtacaaggccaaccgcccgcccgcgcccgaggatctggtgccgcagttc
ccgctgacccgcgaggcgacccgcgcgttcaacatcgcctgcaaggaagtcgaagggttt
gaggccgacgacatcatcgccaccctggcgcatcaggcgcgcgatgccggcgggcgggtg
accatcatctcctcggacaaggacctgatgcagctggtcggcggcggcgtcgagatgctg
gacgcgatgaagaacaagcgcatcgacagcgacggcgtggtggagaaattcggtgtcggc
cccgaccgggtggtggatgtgcaggcgctggccggcgacagcgttgacaacgtgccgggc
gcaccggggatcggaatcaagaccgcggcgctgctgatcaatgaattcggcgatctggaa
accctgctggaccgcgccgaggagatcaaacagcccaagcgccgccagaccctgatcgac
aagcgcgaacagatcgagctgagcaaaaagctggtgcagctggattgcagcatggagctg
gatttcaccctcgatgatctggaggtgatggagccggatgcggaaaccctgctgaccttc
ctgtcggagatggaattccgcaccctgaccaaacggctggcggatcagctgggcatggat
gcgccggcaattccggaagcgcccgccgctgcggcggccgccgcagcagcgccggactcc
gtgccgtttgacaaggagaaatacgaatgcgtccgcgacgcggcgggtttgcaggcctgg
gtcgaccgcatccgccagcgcggctgggtggcggtggataccgaaaccaccggactggac
gagatggtggtggatctggtcggcatctcgctctgtgtcgaaccgggcgaggcctgttac
atccccttggcgcataaggccgggggcgatgacctgtttggcggcgaggggctgtctgag
gggcagatgccgctggaagaggctgtcgcaatactgaagggcgtgctggaggatccggcg
gtcctgaagatcggccagaacatgaaatacgacgccaagatcctgcaccgctatggcgtc
gatgtggcgccgatcgatgacaccatgctgatgtcctatgcgctgcatgccggcatgcac
gggcatggcatggatacgctctcggaacgttacctcgaccacacgccgatcccgatcaag
ccgctcttggggtccggcaaatcggcgatcacttttgaccgggtgccgatcgaggacgcg
gtgccttatgccgccgaggacgccgatatcaccctgcgtctgtggcagaccttcaagccg
cagctgcatcaggagcgggtgaccacggtttatgaaacgctggaacggccgctggtgccg
gtgctggcggatatggagcgcaacggcatcaaagtggaccgcgataccctcagccggatg
tccaacgcctttgctcagaagatggcggcgctggaggccgaaatacacgaactggcaggg
cagaccttcaacgtcggctcacccaagcagctgggcgagatcctgttcgacaagatgggg
atcgagggcggcaagaagggcaagaccggcgcctatgccaccggggcggatattctcgaa
gacctggcgaccgaacacgatctgcccgcgcgggtgctggactggcggcagctctcgaag
ctgaaatcgacctacaccgatgcgctgcaggatcatatcaatccggacaccgggcgggtg
catacctcttatgcccagaccggggccagcaccgggcggatggcctcgaccgatccgaac
ctgcagaatatccctgtgcgcaccgaggaaggccgccgcatccgcgaggcctttgtcgcg
gaagagggcaatgtgctgttgtcgctcgactacagccagatcgagctgcgcattctggcc
catatggccgggatcgatgcgctgaagcaggcctttgccgaagggcaggacattcacgcg
atgaccgcttcggagatgttcgaggtgccgctggacgagatgacgccggaaatccgccgc
caggccaaggcgatcaactttggtgtgatctacggcatctccggctttggcctggcgcgc
aacctgcgcattccgcgcaaggacgcgcagggcttcatcgaccgctatttcgaacgcttc
ccgggcatccgccgctacatggatcagacggtggagtttgccaaggagcacgggtttgtg
cagaccctgttcgggcgcaagatccacaccgccgagatcaacgccaaggggccgaaggcc
ggctttgccaaacgcgccgcgatcaacgcgccgatccagggcaccgcggccgatgtgatc
cgccgcgccatggtgcgcatgcccgaggccatcgcccatctgcccgcgcggatgctgctg
caggtgcacgatgaactcttgttcgaagtgcccgaatcggcggtggaagagaccatcgaa
accgcccgccgcgtgatggaaaccgctgccgatccggcggtgcatctggacgtgaagctg
gtggtggacgcgggccgcgggcaaaactgggccgaggcgcactaa
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