Leisingera methylohalidivorans: METH_19075
Help
Entry
METH_19075 CDS
T02961
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmd03032
]
METH_19075 (gyrB)
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_19075 (gyrB)
Enzymes [BR:
lmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
METH_19075 (gyrB)
DNA replication proteins [BR:
lmd03032
]
Prokaryotic type
DNA Topoisomerases
METH_19075 (gyrB)
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
METH_19075 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHD02443
UniProt:
V9VWW9
LinkDB
All DBs
Position
complement(3755021..3757438)
Genome browser
AA seq
805 aa
AA seq
DB search
MSGNEQAPAEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADHVTVKIHADSSVSVSDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWRDGKEHIARFERGETAKHLEVVGDCGDRTGTEVRFLAST
DTFSNLDYIFETLEKRLRELAFLNSGVRIILIDERPAERLEIELFYEGGVKEFVKYLDRH
KTPVMETPVYIIGEKDEIVVEIAMWWNDSYHETVLPFTNNIPQRDGGTHVAGFRGALTRT
INNYAQTSGIAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVESL
VGEKLSEWFEENPGQAKQIVGKIVEAALAREAARKARELTRRKTAMDVNYLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRQTQAILPLKGKILNVERARFDRMLGSQEIGNLVM
ALGTGIGRDEFNIEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQP
PLYKVSRGKSEVYLKDQAAMDDYLVNQGVEGAVLKLGTGEELSGQDLKRVVDEARQLKRV
LDAFPTHYPRHILEQAAVAGAFVPGAVDSDLQGVADKVAARLDAIALEYERGWQGRITQD
HGIRLARILRGVEEVRTLDGPMLRSGEARKTGSFTQSLQEVYGTTAQLHRRDRSQIIHGP
LELLKAILEEGEKGLSLQRYKGLGEMNPDQLWETTLDPDARTLLQVRIDDMIEADDLFTK
LMGDVVEPRREFIQKNALSVENLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaacgagcaggcccccgcagaatatggcgcggattccatcaaggttctcaaa
gggttggaggcggttcgcaagcgccccggcatgtatatcggggacaccgacgatggctcg
ggcctgcaccacatggtctatgaagtcgtggacaacggcatcgacgaggcgctggcgggc
cacgccgatcatgtgacggtgaaaatccacgccgattccagcgtttccgtcagcgacaac
gggcgcggcattccggtcggcatccacgaggaggaaggcgtctcggcagccgaggtcatc
atgacccagctgcatgccggcggcaagttcgacagcaactcctacaaagtctcgggcggc
ctgcacggcgtgggtgtttcggtggtgaacgcgctctccgattggctggaactgcgcatc
tggcgcgacggcaaggagcatatcgcccggtttgaacgcggcgagaccgccaagcatctt
gaggtggtcggcgattgcggcgatcggaccggcaccgaggtgcgcttcctggcttcgaca
gacacgttttccaacctcgactacatctttgaaacgctggaaaagcggctgcgggaactg
gccttcctgaactccggcgtccgtatcatcctgatcgacgaacgcccggcggaacggctg
gaaatcgagttgttctacgaaggcggcgtcaaggaattcgtcaaatacctggaccgccac
aagaccccggtaatggaaaccccggtgtacatcatcggcgaaaaggatgagatcgttgtc
gaaatcgccatgtggtggaatgacagctatcatgaaacggtgctgccgtttaccaacaac
attccgcagcgcgatggcggcacccatgtcgcgggcttccgcggcgcgctgacccggacc
atcaataattacgcgcagacctcgggcatcgcgaagaaggaaaaagtcagcttcaccggc
gacgacgcccgcgaagggctgacctgcgtgctgtcggtgaaagttccggatccgaaattc
tccagccagaccaaggataagctggtgtcgtccgaggtgcgcccggtggtcgaaagcctg
gtaggggaaaaactgtcagagtggtttgaggaaaaccccggccaggccaagcagatcgtc
ggcaagatcgtcgaggccgctctggcccgcgaggccgcccgcaaggcccgcgaactgacc
cgccgcaagactgcgatggatgtgaattatctggccggcaagctgaaagactgttccgag
aaagacccttccaagaccgaagtcttcctcgtcgagggggattcggccggcggctcggcc
cagaccggccgggaccggcagacgcaggcgatcctgccgctgaaaggcaagatcctgaac
gtggagcgcgcccgctttgaccggatgctgggcagtcaggagatcggcaacctggtgatg
gcgctgggcaccggcatcggccgtgacgagttcaatatcgaaaaactgcgctaccacaag
attgtcatcatgaccgatgcggacgtcgacggcgcccatatccgcaccctgctgctgacc
ttcttctaccggcagatgccggagctgatcgaaggcggctacctctatattgcgcagccg
ccgctctataaggtcagccgcggcaaatccgaggtctacctgaaggatcaggccgctatg
gatgattacctggtcaaccagggggtcgagggcgcggttctgaagctgggaacgggcgaa
gagctgtccggccaggatctgaaacgcgtggtcgatgaggcgcgccagctgaaacgggtg
ctggatgccttcccgacccattacccgcgccacattctggaacaggccgccgtggcaggc
gccttcgtccccggtgcggtggattccgatctgcagggcgtcgccgataaggttgcggcg
cggctggacgccattgcgctggaatatgagcgcggctggcagggccggatcactcaggat
cacggcatccgcctcgcccgcatcctgcgcggcgtcgaggaagtgcgcaccctggacggc
ccgatgctgcgctccggcgaggcgcgcaagaccggcagcttcacccaaagcctgcaggaa
gtctacggcaccaccgcccagctgcaccgccgcgaccgcagccagattattcacgggccg
ctggagcttctgaaagcgatcctggaggagggcgaaaagggcctctcgctccagcgctac
aaaggcctcggcgaaatgaacccggaccagctgtgggagaccacgctggatcctgatgcc
cgcaccctgctgcaggtgcggatcgacgatatgatcgaggcggatgacctgttcaccaaa
ctgatgggcgatgtcgtcgaaccccgccgcgagtttatccagaagaacgcgctcagcgtc
gaaaacctggatttctga
DBGET
integrated database retrieval system
