Leisingera methylohalidivorans: METH_19100
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Entry
METH_19100 CDS
T02961
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03030
DNA replication
lmd03430
Mismatch repair
lmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METH_19100
03430 Mismatch repair
METH_19100
03440 Homologous recombination
METH_19100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmd03032
]
METH_19100
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_19100
Enzymes [BR:
lmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
METH_19100
DNA replication proteins [BR:
lmd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
METH_19100
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
METH_19100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AHD02448
UniProt:
V9VWX4
LinkDB
All DBs
Position
complement(3760613..3761734)
Genome browser
AA seq
373 aa
AA seq
DB search
MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDSVQFRATDLDIEVVDKAPAQ
VERAGATTVAATTLHEIVRKLPDGALVTLSADAATGRLTVEAGRSNFSLATLPREDFPVM
ASSEYHSNFAAKAAVLRRLFDKSKFAISTEETRYYLNGVYLHVSNGTEGGKALRAVATDG
HRLARIDAELPLGAEDMPGVIVPRKTVGELRKLLDDDDMDIAVSVSETKVRFATPNITLT
SKVIDGTFPDYTRVIPAGNTRRLEVDAAEFAQAVDRVATVSSERSRAVKLQLEEDRLILS
VNAPDSGAAEEELAVAYNDERLEIGFNAKYLLEIANQVDRENAVFMFNSSGDPTLMREGS
DESAVYVVMPMRV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcagcatcgaacgcggcacgcttctcaaggctgtggctcaggcacagtctgtg
gttgagcgccgcaataccattccaatcctggcgaatgtgctgatcgaagccgagggcgac
agcgtccagttccgcgccaccgacctggatatcgaagtggtcgacaaggcgcccgcccag
gtggaacgcgccggtgccaccaccgtggctgccaccaccctgcacgagattgtccgcaag
ctgcccgacggtgcgcttgtcaccctcagtgctgacgccgccaccggccgtctgacggtg
gaggcgggccggtcgaacttctcgctcgcgaccctgccgcgggaggatttcccggtgatg
gcctcgtcggaataccattcgaacttcgccgccaaggccgcggtgctgcgccgtctgttc
gacaagtcgaaatttgcgatctccaccgaggagacccgctactacctgaacggtgtctat
ctgcatgtctccaacgggacggaaggcggcaaggcgctgcgggccgtggccaccgacggc
caccgtctggcccggattgacgccgaactgccgctgggcgccgaggacatgccgggcgtg
atcgtgccgcgcaaaaccgtgggcgagctgcgtaagcttttggatgatgatgacatggac
atcgccgtgtcggtctcggaaaccaaggtgcgctttgccaccccgaacatcaccctgacc
tccaaggtgatcgacggcaccttccccgactacacccgggtgatcccggccggaaacacc
cgccgtctggaggtggacgccgccgagtttgcccaggcggtggaccgggtcgcaactgtg
tcctcggaacgctcccgcgcggtgaagctgcagttggaagaagaccgcctgatcctgtcg
gtgaatgcgccggacagcggtgccgcggaggaagagctggcagtggcctataacgacgaa
cggctggaaatcggatttaatgccaagtacttgctggagatcgccaatcaggtggaccgc
gaaaacgctgtgttcatgttcaactcctccggcgatccgactctaatgcgcgaaggcagc
gacgaaagcgccgtttacgtcgtgatgccgatgcgggtttga
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