Leisingera methylohalidivorans: METH_20115
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Entry
METH_20115 CDS
T02961
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmd03016
]
METH_20115
Transfer RNA biogenesis [BR:
lmd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
METH_20115
Prokaryotic type
Methyltransferases
METH_20115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
AAA_28
RsgA_GTPase
AAA_29
GBP
AAA_18
AIG1
Motif
Other DBs
NCBI-ProteinID:
AHD02629
UniProt:
V9VY15
LinkDB
All DBs
Position
complement(3965285..3966571)
Genome browser
AA seq
428 aa
AA seq
DB search
MDTIFALASAQGKAGVAVVRVSGPLAHEAGAQLCGGVLPARGKSLRILQDQSGERLDEAL
VLSFTAPKSFTGENTIEFQVHGSTAVVSAVLETLGGITGLRMAEPGEFTRRALENGNLDL
AQVEGLADLIDAETEAQRKQAQVILAGGLGKLAESWRASLIRAASLIEVTIDFADEEVPV
DVTPEVSALLAEVQAGLVRETDGVKIAERIRSGFEVAIIGAPNVGKSTLLNALAGREAAI
TSEFAGTTRDVIEVRMDLAGLPVTLLDTAGLRDTDDHVEGIGIALARKRAEDADLRVFLA
EDTDILDVPMENGDVRLRPKADLRGDAVNAISGKSGQGIDRLVEHISMILQNRSAQAGIA
TRARHRDAMLSALASLNEAQDILSRGSGFYDIAAEEMRSAIRALETLVGRIGVENLLDEI
FSSFCLGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatctttgcgctggcttccgcacaagggaaggccggggtcgcggtagtccgc
gtctcggggcctttggcgcatgaagccggcgcgcaactttgcggcggagtgttgccggcg
cggggcaaaagcctgcgaatcctgcaagaccaatcaggagagcgccttgatgaggcattg
gtgctgagctttacggctcccaaaagcttcacaggtgaaaatactattgagtttcaagta
catggaagcacagctgttgtttcagccgtgcttgaaaccctgggtggcatcaccggtttg
cggatggctgagccaggtgaatttacccgtcgcgccttggaaaacggcaacctggacttg
gctcaggttgaagggctcgcggatttaattgacgcggaaaccgaagcgcaacgcaagcag
gcccaggtaattcttgccggcggattggggaagttggctgaatcctggcgcgcaagttta
atccgtgcggcatccttgattgaagtaacgattgatttcgctgatgaagaagtcccagta
gatgtaactccggaagtttccgctctattggccgaagttcaagccggccttgtaagagag
acagatggagtgaaaattgcggaacggatccgtagcgggttcgaagtggccatcattggg
gctccgaatgtcggaaaatcaacactattgaatgcgctggccggccgcgaggcagccatt
acgtctgaatttgccggcaccacccgggatgttatcgaagtgcggatggatctggcgggc
ctgccagtgactttgctggatactgcgggtttgcgggataccgacgaccacgtcgaaggc
attggtatcgctttagcacggaaacgcgcggaagatgcagatttacgtgtcttcttggcg
gaagatactgacattcttgatgtcccgatggagaatggagatgtccgtcttcgaccaaag
gcggaccttcgcggcgatgcggtgaatgcaatctcaggaaaatccgggcagggtatagac
agacttgtcgaacacatctcgatgattctgcaaaatcgctcggctcaagccggcattgct
acgcgcgctcggcaccgggatgcgatgttatctgctttggcaagtttaaacgaagcacag
gatattctatcgcgcggctctggattttatgatatcgccgccgaggagatgcgctcggcc
atacgggcgctggaaacgctagtgggccggatcggagtggagaatctcctagatgagatt
ttctcgagcttctgcctggggaagtga
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